Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02292 ATGAGGATCATCAATGAGCCCACTGCGGCAGCTATCGCTTATGGACTAGACAAGAAAGCATCCAGTGTTGGCGAAAAGAATGTACTCATATTTGATTTAGGTGGAGGAACATTTGATGTCTCTCTTCTCACAATTGAGGAGGGTATTTTCGAAGTGAAGGCAACTGCCGGTGACACCCATCTCGGAGGTGAGGACTTCGACAACAGATTGGTTAACCATTTCGTTCAGGAATTCAAGAGGAAGCATAAGAAGGACATCAGTGGAAATCCAAGGGCTCTGAGGAGATTGAGGACTGCTTGTGAAAGGGCGAAGAGAACCCTTTCATCCACTGCTCAAACTACAATCGAGATTGATTCTTTGTATGAAGGAATTGATTTCTACACAACCATCACTCGTGCTAGATTCGAGGAGCTCAACATGGACCTGTTCCGAAAGTGTATGGAGCCAGTTGAGAAGTGTCTGAGAGATGCAAAGATGGACAAAAGCAGTGTCCATGATGTTGTCCTTGTTGGTGGCTCTACGAGGATTCCTAAGGTGCAGCAGCTACTGCAGGATTTCTTCAATGGCAAGGAGCTCTGCAAGAGTATCAATCCTGACGAGGCAGTTGCTTATGGGGCTGCTGTTCAAGCTGCTATCTTGAGTGGTGAGGGAAATGAGAAAGTGCAGGATCTTCTTCTTTTGGATGTCACTCCTCTGTCTCTTGGCTTGGAGACTGCTGGAGGTGTGATGACAGTTTTGATCCCAAGGAACACCACCATACCCACAAAGAAGGAGCAAGTATTTTCCACATACTCAGACAACCAGCCTGGTGTTCTTATTCAGGTCTATGAGGGTGAGAGAACAAGAACCAGAGATAACAACTTGCTGGGCAAGTTTGAACTTTCCGGCATTCCTCCAGCTCCAAGAGGTGTTCCTCAGATCACTGTTTGCTTCGACATCGACGCCAACGGTATTCTAAATGTTTCTGCAGAGGATAAAACAACTGGACAGAAGAACAAGATCACCATTACCAACGACAAAGGAAGGTTGTCCAAAGAGGAGATTGAAAAACTGGTTCAAGAAGCAGAGAAGTTCAAGGCGGAAGATGAGGAACACAAGAAGAAAGTTGAATCAAAGAATGCTTTAGAGAACTATGCATACAATATGAGGAACACAATCAGAGATGAAAAGATAGGTGGTAAGCTTGCCCCAGCAGACAAGAAGAAGATTGAAGATGCAGTTGAACAGGCCATTCAATGGCTAGACGGCAACCAGCTTGCAGAGTCCGACGAATTTGAGGACAAAATGAAAGAACTCGAATCTATTTGCAACCCCATCATAGCCAAGATGTATCAAGGTGGGGCTGACATGGGCGGCGGCGCAATGGACGATGATACTCCTCCATCAGGCGGCAGTGGCGCTGGTCCTAAGATTGAGGAAGTTGATTAA 1428 45.87 MRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKLVQEAEKFKAEDEEHKKKVESKNALENYAYNMRNTIRDEKIGGKLAPADKKKIEDAVEQAIQWLDGNQLAESDEFEDKMKELESICNPIIAKMYQGGADMGGGAMDDDTPPSGGSGAGPKIEEVD 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19373503 19374930 - Cp4.1LG01g23890.1 Cpe01g02292 463605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02292 475 ProSitePatterns Heat shock hsp70 proteins family signature 3. 167 181 IPR018181 -
Cpe01g02292 475 Coils Coil 341 368 - -
Cpe01g02292 475 MobiDBLite consensus disorder prediction 446 475 - -
Cpe01g02292 475 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 218 372 IPR029047 -
Cpe01g02292 475 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 370 450 IPR029048 -
Cpe01g02292 475 Gene3D - 19 193 - -
Cpe01g02292 475 PRINTS 70kDa heat shock protein signature 36 46 - -
Cpe01g02292 475 PRINTS 70kDa heat shock protein signature 196 216 - -
Cpe01g02292 475 PRINTS 70kDa heat shock protein signature 223 242 - -
Cpe01g02292 475 PRINTS 70kDa heat shock protein signature 304 320 - -
Cpe01g02292 475 PRINTS 70kDa heat shock protein signature 164 180 - -
Cpe01g02292 475 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 219 376 IPR029047 -
Cpe01g02292 475 PANTHER HEAT SHOCK PROTEIN 70KDA 1 455 IPR013126 GO:0005524|GO:0140662
Cpe01g02292 475 SUPERFAMILY Actin-like ATPase domain 25 215 IPR043129 -
Cpe01g02292 475 Gene3D - 373 446 IPR029048 -
Cpe01g02292 475 Gene3D - 1 211 - -
Cpe01g02292 475 Pfam Hsp70 protein 1 445 IPR013126 GO:0005524|GO:0140662
Cpe01g02292 475 Gene3D Actin; Chain A, domain 4 63 145 - -
Cpe01g02292 475 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 455 - -
Cpe01g02292 475 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02292 Cpe-Chr1:19373503 Cpe13g00849 Cpe-Chr13:7464166 0 dispersed
Cpe01g02287 Cpe-Chr1:19349625 Cpe01g02292 Cpe-Chr1:19373503 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02292 K03283 - csv:101211905 905.59