Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02339 ATGCAGAGCGCTGTATTGGCTTTGGCCATGTGTTTTTCCCCTAGCACTCCTGCTAGGGCTACTTCTTTTCCATTGCCTCTAATTTCATGCCGACTTCGAAGCCCTAATTTCCCTCACTTTCCTCACATTGTTCCGTTTCGTTCCTTCCCATCCTCGATCGCTGTTTCTTGCTCCGGATTCAGTTCGAGGCTCCAGAAATTCACGAGAACTGCGGCTTCCTTGCCGGAGAGCGCTGGCGAGACTGAGGAATCGGCCGATTTCGTTAACAATCTGCGGCTTGGTTCAATGTTTGGTGTTTGGTACCTTTTGAATATCTACTACAACATTTTCAACAAACAGGTTCTGATTCTCCTTTTTGCTTTTTGTTTCTGCACTGTTCTTGTTCTGCTCGTTCTGAAAGCCTTCCCCTTTCCAACTACGGTGACCGCTTTTCAATTCGCGTGTGGGACGGTCATAGTAAGCTTAATGTGGGCTCTCAATTTTCATCCCAGACCCAACGTCAATCGCTCCCAGTTTGCTGCCATTCTTCCGCTGGCTGTAGCGCACACCATGGGCAACATATTGACCAATGTGAGTCTTGGCAAAGTTGCGGTTTCATTCACTCACACCATCAAAGCAATGGAGCCCTTTTTCACTGATTGGGTTCAGCAGTGCCATGGCTTCAAATCTCACAAATCAATCACTAAAAAGCTCATGGTCCACAAAGAGGCACTGGACAATATCAATCTCTTCTCTGTAATTACTATCATTTCATTTATCCTGCTGGTTCCCTCAGCTCTTCTCCTTGAAGGCACTAAATTCAGTCCTTCATACCTGCAATTAGCTGCAAATCAAGGGTTGAATGTCAGCGAGCTATGCATTAGGTTGCTTCTATCTGGCATCTGTTTTCATAGCTATCAGCAGGTTTCTTATTCAATACTACAGGAAATTTCACCAGTAACCCATGCAGTAGGAAACTCTCTGAAGCGGGTGGTGGTGATAGTGTCCTCTGTTATTTTCTTCCAAACAGCCGTCTCACATCTAAACGCCCTCGGTATTGTTCTCATACCCTTCTTGAATGGAAGGCTTCTGATGATCATATTATATGGATCAAAGATTTCCCTGACAAATCAGCTCCAGCAGATCCATCTCCGATTTCATCGCATCATTCTGCATCAGATTCAAACACTCCATCTCCGTCCCGGAACCGGAACCCGAACCCGAACCCGACCCCGACCCGAACTCGAAGTAGAACCCTCCGCCGTTCACCGCCGCAGGGCTGTGGCTGTCCACAAGCTGCGGCATCGAATCGGAGATTTTGCGGTCTCCGGCGGTGACGGAATTGATGTAATTTTGAAGGATGGAGCCGTTGGAATTGGAATCACGCTTCTTGGAATTCTGGCGGCGTTTGGTGGCGTTCCAGTGGTTTTTTATGGTGTTTTCAGTCCTTCCAGGCAGCCGCCGGGCAATCTCCGCCCATCTGTTTCCGATGTCTTTGTGAGCTTCTAT 1488 47.65 MQSAVLALAMCFSPSTPARATSFPLPLISCRLRSPNFPHFPHIVPFRSFPSSIAVSCSGFSSRLQKFTRTAASLPESAGETEESADFVNNLRLGSMFGVWYLLNIYYNIFNKQVLILLFAFCFCTVLVLLVLKAFPFPTTVTAFQFACGTVIVSLMWALNFHPRPNVNRSQFAAILPLAVAHTMGNILTNVSLGKVAVSFTHTIKAMEPFFTDWVQQCHGFKSHKSITKKLMVHKEALDNINLFSVITIISFILLVPSALLLEGTKFSPSYLQLAANQGLNVSELCIRLLLSGICFHSYQQVSYSILQEISPVTHAVGNSLKRVVVIVSSVIFFQTAVSHLNALGIVLIPFLNGRLLMIILYGSKISLTNQLQQIHLRFHRIILHQIQTLHLRPGTGTRTRTRPRPELEVEPSAVHRRRAVAVHKLRHRIGDFAVSGGDGIDVILKDGAVGIGITLLGILAAFGGVPVVFYGVFSPSRQPPGNLRPSVSDVFVSFY 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19640910 19645900 + Cp4.1LG01g23460.1 Cpe01g02339 463652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02339 496 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 51 212 - -
Cpe01g02339 496 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 223 348 - -
Cpe01g02339 496 PANTHER SOLUTE CARRIER FAMILY 35 223 348 - -
Cpe01g02339 496 PANTHER SOLUTE CARRIER FAMILY 35 51 212 - -
Cpe01g02339 496 Pfam Triose-phosphate Transporter family 222 348 IPR004853 -
Cpe01g02339 496 Pfam Triose-phosphate Transporter family 92 212 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02339 Cpe-Chr1:19640910 Cpe19g01035 Cpe-Chr19:7167860 6.80E-35 dispersed
Cpe01g02339 Cpe-Chr1:19640910 Cpe20g00246 Cpe-Chr20:1392890 7.43E-86 wgd
Cpe01g02339 Cpe-Chr1:19640910 Cpe09g01023 Cpe-Chr9:9014219 3.87E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02339 K15283 - csv:101217436 444.891