Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02356 ATGGATCCGAACTTGATCTGGGGTTATCCTGAAAAGAGGGATTCATGGAGGACAATTTTCACTTTGGCTTATCAGGGTTTGGGGGTTGTTTATGGGGATTTGAGCACTTCTCCGCTGTATGTGTACAAAAGCACTTTTGCAGAAAATCTTCAGCACTCTGAGACGAATGAGGAGGTTTATGGGGTTCTTTGCTTTGTGTTTTGGACTTTGACACTTATCCCTTTACTTAAATATGTGTTCATAGTTCTTAAAGCTGATGATAATGGCGAAGGGGGAACTTTTGCTCTGTATTCACTGCTCTGCCGCCATGCTCGCCTTAGCTCCCTTCCAAATCACCAGCTTGCAGATGAGGAGCTTTCTGCTTATAAAAGAGATACACCTGAACCCACTAGTAATTTTAGTTTCAGTTCTTGTTTGAAATCAACTCTGGAGAAATGTAAAGTTTTGCAGAGAATCTTGCTTGTTCTTGCCTTGATTGGGACTTGCATGGTTATCGGTGATGGAGTTCTCACACCAGCAATTTCAGTCTTTTCAGCTGTGTCAGGGGTTGAGTTATCCATGGCTAAGGAACATCACCAATATATTAAAGTCCCTCTGGCATGTGCCATTCTGGTATTCTTGTTTGCATTGCAACATTACGGGACGCATCGGGTCGGGTTCCTGTTTGCTCCAGTTGTAATTGTATGGCTTCTATGCATCAGTGCCATTGGTTTGTACAATATCTTCTATTGGAATCCTCTTGTTTACAAAGCACTCTCCCCATATTACATGTATAAGTTCTTGAAAAAAACCAAAAAGCAAGGTTGGATGGCGTTGGGCGGAGTCCTCTTGTGTATAACGGTTCTTGCATATATGGGACAAGCTGCTTATCTTTCTAAGCATCACAATCTCGACAACGATTATCGAATCGGATTCTATGTTTCTGTTCCTGAGAGAGTAAGATGGCCTGTTCTTGCAATAGCAATACTTGCAGCAGTTGTGGGCAGTCAAGCAATCATCACGGGCACGTTTTCGATCATCAAACAATGTTCTTCTTTGGGTTGTTTTCCAAGAGTAAAGATCGTTCATACGTCTTCGAAAATACATGGCCAGATTTACATTCCCCTCATCAACTGGATACTAATGATATTATGTTTAGCTGTTACCATTGGATTTCGAGAGACAGAACGCTTGGGCAATGCAGCAGGGTTGGCAGTTATTACCGTTATGCTAGTCTCGACGTGTCTAATGTCACTTGTTATTGTGTTATGTTGGCATAGAAGTGTCTTCCTAGCCATAGCCTTCCTAGTCTTCTTTGGCTCCATAGAAGCTCTCTACTTTTCTGCCTCTCTTATGAAGTTCTTTGAAGGGGCTTGGGTTCCTATTGCACTTTCACTGACATTCCTTGTGGTTATGTATGTTTGGCACTATGGCACTCTAAAGAAATATGAGGCTGATGTTGAAAACAAAGTCCCTATAAATTGGCTCCTCGGTATAGGTCCCAAAATCGGGATCGTTCGGGTTCGGGGGATCGGCCTTGTACATACCGAACTCGTTTCAGGGATCCCTTCCATTTTCTCTCATTTTGTCACAAACGTTCCAGCCTTCCACCAAATTCTAGTCTTCCTCTGCATCAAATCTGTCACAATGCCTCATGTGAGACCTGAGGAAAGGTTCTTGGTAGGAAGAGTTGGGCCAAAGGAGTATCGACTCTACCGCTGCATTGCACGATATGGCTACCGTGATGTGCACAAGGACGACTTGGAATTCGAGAGAGACCTTGCCTGCAGCATTGCAGAATTCATCCGATCCGAGAAAACAGAATGCAACACTTTCAGACACGAGGACTTGGACGACAATGACGACAACGAAAGAATGAGAGTGATTGGGACTTCATCAACTCAACTAAACGGTATTCAAATGTGTGAAAACGAATCGTGTTCTTTGCCGATCATCATCAGCAATTCAGAGATAAGGTCGGAGAGATTGAGGAAGAAAAGAGTAAGATTCGTTCTATCCGAAAGTACGAAAATGGATGTCGATACGAGGAGAGAGCTGCAAGAGTTGATGGAAGCAAGGGAGGCAGGAATGGCATTCATAATGGGACATTCATACGTAAAGGCAAAGAAAGGATCAGGTTGGATGAAGAAGGTTGTGCTTAATTATGGGTATGATTTCTTGAGGAAAAACTCAAGAGGCCCATCTTATGCTTTGAGTATTCCTAATGCTTCTACTCTTGAGGTTGGTATGGTTTATTATGTTTAA 2244 42.83 MDPNLIWGYPEKRDSWRTIFTLAYQGLGVVYGDLSTSPLYVYKSTFAENLQHSETNEEVYGVLCFVFWTLTLIPLLKYVFIVLKADDNGEGGTFALYSLLCRHARLSSLPNHQLADEELSAYKRDTPEPTSNFSFSSCLKSTLEKCKVLQRILLVLALIGTCMVIGDGVLTPAISVFSAVSGVELSMAKEHHQYIKVPLACAILVFLFALQHYGTHRVGFLFAPVVIVWLLCISAIGLYNIFYWNPLVYKALSPYYMYKFLKKTKKQGWMALGGVLLCITVLAYMGQAAYLSKHHNLDNDYRIGFYVSVPERVRWPVLAIAILAAVVGSQAIITGTFSIIKQCSSLGCFPRVKIVHTSSKIHGQIYIPLINWILMILCLAVTIGFRETERLGNAAGLAVITVMLVSTCLMSLVIVLCWHRSVFLAIAFLVFFGSIEALYFSASLMKFFEGAWVPIALSLTFLVVMYVWHYGTLKKYEADVENKVPINWLLGIGPKIGIVRVRGIGLVHTELVSGIPSIFSHFVTNVPAFHQILVFLCIKSVTMPHVRPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFERDLACSIAEFIRSEKTECNTFRHEDLDDNDDNERMRVIGTSSTQLNGIQMCENESCSLPIIISNSEIRSERLRKKRVRFVLSESTKMDVDTRRELQELMEAREAGMAFIMGHSYVKAKKGSGWMKKVVLNYGYDFLRKNSRGPSYALSIPNASTLEVGMVYYV 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19727385 19732411 + Cp4.1LG01g23230.1 Cpe01g02356 463669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02356 747 Pfam K+ potassium transporter 281 575 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g02356 747 Pfam K+ potassium transporter 24 280 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g02356 747 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 281 746 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g02356 747 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 280 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cpe01g02356 747 PANTHER POTASSIUM TRANSPORTER 6 281 746 - -
Cpe01g02356 747 PANTHER POTASSIUM TRANSPORTER 6 11 280 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02356 Cpe13g00909 CCT
Cpe01g02356 Cpe03g00553 CCT
Cpe01g02356 Cpe13g00909 ECH
Cpe01g02356 Cpe03g00553 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02356 Cpe-Chr1:19727385 Cpe11g00002 Cpe-Chr11:3133 0 dispersed
Cpe01g02356 Cpe-Chr1:19727385 Cpe13g00909 Cpe-Chr13:7755145 0 wgd
Cpe01g02356 Cpe-Chr1:19727385 Cpe03g00553 Cpe-Chr3:3247870 0 wgd
Cpe01g02356 Cpe-Chr1:19727385 Cpe04g00561 Cpe-Chr4:6045306 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02356 K03549 - csv:101218141 1342.41