Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02361 ATGGCGGGAAGTTACTTTATGGAAGGCGTTCTGCCATTTCCGGCGATGGTAACCATGGAGTGCATCAACGTCGGTCTCAACACTCTTTTCAAAGCCGCCACCGCCTCCGGCATGAGCCACCACGTCTTCATCGTTTATTCTTACTCCCTCGCCGCCTTCTTCCTCCTCCCTTCTCCCTTCATCTCTCGCAGATCCACGCGGCTTCCACCGCTCAATTTCTCTATACTCTCGAAGATCGCTCTTCTCGGACTCATCGGTTCTTGTTCGCAGATAATGGGATACACGGGAATCAATTACAGTTCTCCGACTCTTGCTTCCGCCATCAGCAACCTTGTTCCTGCTTTCACTTTCATTCTCGCCATCATTTTCAGGATGGAGAAAGTGGTGATGAAGAGCAGTAGCAGTCAAGCAAAAGTAATGGGCACCATAATATCCATATCAGGTGCATTTGTAGTGACGCTTTACAAGGGTCCAAGGACAAAAATAATGAAGGAATACCCAGAAGAGGCAACAGTGATCTTCTTCTACAACATAACTGTGGCCTTCATAGCTGCAGTTGTAGGCGTGATCTTAGAGACAGATCCAAGTGCTTGGATTTTGAGGCAAAATACAGCGTTGGCCTCTGTTTTATGCTCCGGACTTTTTGGATCATGTTTGAATAATACAGTTCATACATGGGCACTCCGGTTGAAAGGGCCGGTGTTTGTAGCGATGTTTAAGCCATTGTCGATTGTCGTCGCCATTGTAATGGGTGTTCTGTTTCTTGGTGATTCTCTATATCTTGGAAGTCTTATTGGAGCATCCATAATTTCCATAGGGTTTTATACTGTAATGTGGGGAAAAACAAGAGAAGAAGTGGGCGATGAAGAAGAAAAAGAAAGGCATAGCCATAATGTTAGTGATGACAAGGAACCACATGAAGATCAGAAAGTACCTCTTCTTGGAAACTACAACACACAGAGATACAGTTCAGATCATGTATGA 984 45.12 MAGSYFMEGVLPFPAMVTMECINVGLNTLFKAATASGMSHHVFIVYSYSLAAFFLLPSPFISRRSTRLPPLNFSILSKIALLGLIGSCSQIMGYTGINYSSPTLASAISNLVPAFTFILAIIFRMEKVVMKSSSSQAKVMGTIISISGAFVVTLYKGPRTKIMKEYPEEATVIFFYNITVAFIAAVVGVILETDPSAWILRQNTALASVLCSGLFGSCLNNTVHTWALRLKGPVFVAMFKPLSIVVAIVMGVLFLGDSLYLGSLIGASIISIGFYTVMWGKTREEVGDEEEKERHSHNVSDDKEPHEDQKVPLLGNYNTQRYSSDHV 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19749331 19755189 + Cp4.1LG01g23280.1 Cpe01g02361 463674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02361 327 MobiDBLite consensus disorder prediction 286 327 - -
Cpe01g02361 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Cpe01g02361 327 MobiDBLite consensus disorder prediction 286 310 - -
Cpe01g02361 327 MobiDBLite consensus disorder prediction 313 327 - -
Cpe01g02361 327 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Cpe01g02361 327 Pfam EamA-like transporter family 172 278 IPR000620 GO:0016020|GO:0016021
Cpe01g02361 327 PANTHER WAT1-RELATED PROTEIN 9 159 - -
Cpe01g02361 327 PANTHER WAT1-RELATED PROTEIN 160 297 - -
Cpe01g02361 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 283 - -
Cpe01g02361 327 PANTHER WAT1-RELATED PROTEIN 9 159 IPR030184 GO:0016021|GO:0022857
Cpe01g02361 327 PANTHER WAT1-RELATED PROTEIN 160 297 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02361 Cpe13g00914 CCT
Cpe01g02361 Cpe13g00914 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02361 Cpe-Chr1:19749331 Cpe01g02280 Cpe-Chr1:19291497 1.06E-19 dispersed
Cpe01g02361 Cpe-Chr1:19749331 Cpe13g00914 Cpe-Chr13:7778603 3.32E-56 wgd
Cpe01g02361 Cpe-Chr1:19749331 Cpe04g00563 Cpe-Chr4:6062359 4.10E-51 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02361 - - csv:101208880 512.686