Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe01g02372 | ATGGCGCTCTCTGGTTCCATTTCTGAGGATTTGCAGTACTGTGTGAGCCTGCAGAGACTGGATCTGTCTGGTAATTCCTTTTCCGGCGCGATTCCGCCGCATATTTGTAAGTGGCTTCCGTATTTGGTTAATTTGGATTTGTCCAACAATCAATTTTCCGGCCCTATTCCGGCTGATCTCGCCGGATGTTCTTATCTGAATTCGTTAATGTTGTCTAATAATGCGCTTTCGGGTACGATACCAGTTGAGCTTACGAGTTTGAGTAGGCTTAATAAATTTTCTGTTGCGAACAATCATCTCACTGGTTCGATTCCCGAATCTTTTAATAAATTTGGGAGTGAGGATTTTGATGGGAACAGTGAGTTATGTGGAGGGCCTGTTGGATCGAGCTGTGGTGGGTTGAGCAAGAAAAATCTAGCGATTATTATAGCTGCTGGTGTGTTTGGTGCTGCAGCTTCTCTGTTATTAGGTTTTGGGTTATGGTGGTGGTATCATTCTAGGATGAACATGAAGAAAAGAAGGGGATATAGGGATGGGAGTAATGGGGATTGGGCTGATAGATTAAGAGCCTATAAGCTAGTTCAAGTTTCCTTGTTTCAAAAGCCTCTTGTGAAAGTTAAGTTAGCTGATTTGTTAGCTGCTACGAACAATTTCAATGGTGAAAATATAATGGTTTCTTCTAGAACTGGAACTACTTATAGAGCTGCTCTTCCAGATGGCTCTGTGCTTGCTATAAAGCGGCTCAATACCTGCAAGCTTGGTGAGAAGCTGTTTCGGACGGAGATGAACCGGCCCAAGGACAGGTGGTCTATGTATCAGGTTTATCAGTCAATGAAATCAATGGCTAAGGACTACAGTTTCTCTGAACCAGACGATGCGTTCCCACTTTTACTTGGCAAGGGAGATAACGAACCCGTGTAA | 921 | 43.43 | MALSGSISEDLQYCVSLQRLDLSGNSFSGAIPPHICKWLPYLVNLDLSNNQFSGPIPADLAGCSYLNSLMLSNNALSGTIPVELTSLSRLNKFSVANNHLTGSIPESFNKFGSEDFDGNSELCGGPVGSSCGGLSKKNLAIIIAAGVFGAAASLLLGFGLWWWYHSRMNMKKRRGYRDGSNGDWADRLRAYKLVQVSLFQKPLVKVKLADLLAATNNFNGENIMVSSRTGTTYRAALPDGSVLAIKRLNTCKLGEKLFRTEMNRPKDRWSMYQVYQSMKSMAKDYSFSEPDDAFPLLLGKGDNEPV | 306 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 19835416 | 19836969 | + | Cp4.1LG01g23090.1 | Cpe01g02372 | 463685 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe01g02372 | 306 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 1 | 264 | - | - | |
| Cpe01g02372 | 306 | Pfam | Leucine Rich Repeat | 16 | 37 | IPR001611 | GO:0005515 | |
| Cpe01g02372 | 306 | Gene3D | Ribonuclease Inhibitor | 1 | 133 | IPR032675 | - | |
| Cpe01g02372 | 306 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 1 | 264 | - | - | |
| Cpe01g02372 | 306 | SUPERFAMILY | L domain-like | 3 | 119 | - | - | |
| Cpe01g02372 | 306 | Gene3D | Phosphorylase Kinase; domain 1 | 179 | 266 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g02372 | Cpe-Chr1:19835416 | Cpe19g00558 | Cpe-Chr19:4712113 | 2.51E-10 | dispersed | |
| Cpe12g01139 | Cpe-Chr12:9366203 | Cpe01g02372 | Cpe-Chr1:19835416 | 7.20E-53 | transposed | |
| Cpe01g02372 | Cpe-Chr1:19835416 | Cpe13g00930 | Cpe-Chr13:7877322 | 7.02E-167 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe01g02372 | - | - | cmos:111445255 | 446.047 |