Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02418 GCAACATTATTTGAAGTGTTGAGAATAATATTGGAGATACGGAAGCATAAAAGTGAAGCCCCCACCACAGCAACACCTCCCCTTACCTTACGTGATTATTCCTCATCTTCTACTTCTTCTTCTTCTGCTGAATTTGCTTCCACTCTCTCCCATGGTGGTTCTGGTTCCTTCATTCTCCCCATGCCTTCTCTCCCTGGCTTCCCCTTCTCCTCTCCCATGTGGAGCGAGCTTTGCCTGAGGCGAACCACCCCTTCACTCAATGCCCACGACAACATTAACAACACCACCACCGCTGCCGATGAACACCCCATCTCCAACGCCGTTGAGTGCTACGCCTGCACCCAAGTCGGTGTTCCGGCCTTCCATTCCACCAGCTGTGACCATGCCCACCAGCAGCCCGAATGGGAGGCCTCCGCCGGCTCTTCCCTCGTCCCCATTCAACCCACAAAGACCTCTCCTCGCCGCGCCGACCCACAACATCGTTCCGGTCGCTTCGGCAGTGTTCTCGACCCTAGAACCAAGCGGGTCCAAAGATGGAACCGGGCTCTGTTATTAGCCCGTGGAATGGCCCTCGCCGTCGATCCTCTCTACTTCTACGCGCTCTCCATCGGACGTGGTGGGTCGCCGTGCCTGTACATGGACGGTGGATTAATCGCCGTTGTTACTGTTCTCCGCACGTTCCTCGATGTCGTGCACTTGTGGCACGTTTGGCTCCAGTTCCGCCTCGCCTATGTGTCCAAGGAGAGCATGGTCATTGGCTGCGGCAAACTCGTCTGGGACGCTCGTGATATCGCCTCCCACTATGTTCGTTCCTTCAAAGGCTTCTGGTTCGATGCCTTCGTGATCCTCCCAGTTCCTCAGATTGTTTATTGGTTGGTTTTACCAAAACTAATCAGAGAAGAGAGAATCAAGCTTATAATGACTGTAATCTTGTTAATGTTCTTGTTCCAATTCCTCCCAAAAGTTTACCACTCCATTATTTTAATGACAAGAATGCAAAAGGTCACTGGATACATCTTTGGCACCATTTGGTGGGGTTTTGGACTCAATCTCATTGCCTATTTCATCGCCTCTCATGTTGCTGGGGGTTGCTGGTATGTTCTTGCAATACAGCGAGTTGCTTCTTGCATCCAGCAACATTGTGAGAGAAACAAGTGCAACCTATCTCTGTCTTGCTCAGAGGAGGTGTGTTATCAGTTTCTCTCATCTTCTACAACCATAGGAAATTCGTGTGGTCGTAATTCGACTTCTGCCTTTAGGAAGCCCATATGCTTGGATGTTAATGGTCCATTCGCCTATGGCATCTACAAGTGGGCTCTTCCAGTCATTTCTAGCAATTCCATTGCTGTCAAAATTCTTTATCCCATCTTTTGGGGCTTAATGACTCTTAGCACGTTTGGCAATGATCTCGAGCCCACGAGTAATTGGCTAGAAGTATGTTTTAGTATTTGCACAGTACTCAGTGGATTGCTGCTTTTTACTCTTTTGATTGGTAACATCCAGGTTCTTTTGCACGCCGTCATGGCAAGGAGGCGAAAAATGCAGCTGAGATGTCGAGATTTAGAGTGGTGGATGAGGAGACGACAATTGCCATCTCGTTTGAGACATCGTGTTCGACACTATGAACACCAGAGATGGGCAGCCATGGGTGGAGAAGATGAGATGGAACTGATCAATGATTTGCCTGAAGGTCTTAGAAGAGACATTAAACGCCATCTTTGTGTTGATCTTATCAGAAAGGTGCCGCTGTTCCAAAACCTGGATGAGCTGATTCTCGACAACATCTGCGACCGAGTCAAGCCACTTGTATTTTCCAAAGATGAAAAGATTATCAGAGAAGGAGATCCTGTTCCAAGAATGCTATTCATAGTGTGTGGACGTGTAAAACGTAACCAAAGCCTGAGCAAGGGCATGACAGCAACAAGTTTGCTAGAATCGGGAGGATTTCTGGGCGACGAGCTGCTATCGTGGTGTCTTCGGCGCCCATTTCTCGAGAGGCTTCCAGCTTCATCAGCTACATTTGTATGCATTGAACCAACAGAAGTATTTGCCCTGAAAGCAGACCATCTGAAGTACATAACCGATCACTTCCGCTACAAATTTGCCAACGAACGACTGAAGAGAACTGCAAGATATTACTCCTCCAACTGGAGAACATGGGCTGCTGTGAACATACAATTTGCTTGGCGTCGCTACAGAAAGAGGATGAGACGTCCAGTGATAACTGTGGTGGAAAATGGAAGCAATGAACGTAGGCTTCTGCAGTATGCTGCAATGTTCATGTCATTCAGGCCACATGACCATCTTGAATAG 2313 48.29 ATLFEVLRIILEIRKHKSEAPTTATPPLTLRDYSSSSTSSSSAEFASTLSHGGSGSFILPMPSLPGFPFSSPMWSELCLRRTTPSLNAHDNINNTTTAADEHPISNAVECYACTQVGVPAFHSTSCDHAHQQPEWEASAGSSLVPIQPTKTSPRRADPQHRSGRFGSVLDPRTKRVQRWNRALLLARGMALAVDPLYFYALSIGRGGSPCLYMDGGLIAVVTVLRTFLDVVHLWHVWLQFRLAYVSKESMVIGCGKLVWDARDIASHYVRSFKGFWFDAFVILPVPQIVYWLVLPKLIREERIKLIMTVILLMFLFQFLPKVYHSIILMTRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCIQQHCERNKCNLSLSCSEEVCYQFLSSSTTIGNSCGRNSTSAFRKPICLDVNGPFAYGIYKWALPVISSNSIAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVCFSICTVLSGLLLFTLLIGNIQVLLHAVMARRRKMQLRCRDLEWWMRRRQLPSRLRHRVRHYEHQRWAAMGGEDEMELINDLPEGLRRDIKRHLCVDLIRKVPLFQNLDELILDNICDRVKPLVFSKDEKIIREGDPVPRMLFIVCGRVKRNQSLSKGMTATSLLESGGFLGDELLSWCLRRPFLERLPASSATFVCIEPTEVFALKADHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRKRMRRPVITVVENGSNERRLLQYAAMFMSFRPHDHLE 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20101863 20105679 - Cp4.1LG01g22520.1 Cpe01g02418 463731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02418 770 MobiDBLite consensus disorder prediction 136 153 - -
Cpe01g02418 770 CDD CAP_ED 583 690 IPR000595 -
Cpe01g02418 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 109 770 - -
Cpe01g02418 770 Pfam Ion transport protein 188 502 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe01g02418 770 SUPERFAMILY cAMP-binding domain-like 510 697 IPR018490 -
Cpe01g02418 770 MobiDBLite consensus disorder prediction 136 167 - -
Cpe01g02418 770 Gene3D - 212 507 - -
Cpe01g02418 770 Gene3D Helix hairpin bin 509 574 - -
Cpe01g02418 770 SUPERFAMILY Voltage-gated potassium channels 171 504 - -
Cpe01g02418 770 Gene3D Jelly Rolls 581 699 IPR014710 -
Cpe01g02418 770 ProSiteProfiles cAMP/cGMP binding motif profile. 583 662 IPR000595 -
Cpe01g02418 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 109 770 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02418 Cpe-Chr1:20101863 Cpe14g00704 Cpe-Chr14:4622628 3.83E-157 dispersed
Cpe01g02418 Cpe-Chr1:20101863 Cpe18g00596 Cpe-Chr18:6342951 7.13E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02418 K05391 - csv:101203560 1289.63