Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02433 ATGAATGCGAATAGTTCTCGATTTCAGTCGCTTGGTCAGACCGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTATACCCTGTTTCTGTTGTAAAAACGAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCATTTTCTGTAATTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACTGTTATCACCGGTGCAATTCCTGCAAGGATTATCTTCCTTACTGCTTTGGAGACTACCAAAGTAGGAACCTTAAAAATGGTTGAGCCATTGAAATTTTCTGAACCCACACAGGCGGCAATAGCAAATGGGTTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAAGCAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTGATGGGATCCGGGGATTGTATAAAGGTTTTGGATTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGTATCATCTGGAGGTTCTTAGGCCAAAACTCTGGTGCTGAGAAATTTGCTCCTAGCCATGCCCAACTTATTTCTGTTCAAGCTGCAGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACGACGCCATTGGACACTATAAAGACTCGCTTACAGAGCGCCTGTGTGCAAAAGATGAACAGACTTGATCGCAGCCAAGCGAAAGCTTTTTTGGTTTCAACTCTTTTCCCCTCACAACAAGGCCAGGTTGAGCATAGATTTCTATCCACACTTCAATTGCAGATAAGGATTGGTATTAAAGCATTCATGTATTGA 942 42.36 MNANSSRFQSLGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNAFSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGTLKMVEPLKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSSNTRYNGGLDVARKLIKSDGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSGAEKFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQSACVQKMNRLDRSQAKAFLVSTLFPSQQGQVEHRFLSTLQLQIRIGIKAFMY 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20187854 20196382 - Cp4.1LG01g22530.1 Cpe01g02433 463746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02433 313 Gene3D Mitochondrial carrier domain 26 282 IPR023395 -
Cpe01g02433 313 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 263 - -
Cpe01g02433 313 SUPERFAMILY Mitochondrial carrier 19 265 IPR023395 -
Cpe01g02433 313 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 263 - -
Cpe01g02433 313 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Cpe01g02433 313 Pfam Mitochondrial carrier protein 236 266 IPR018108 -
Cpe01g02433 313 Pfam Mitochondrial carrier protein 28 106 IPR018108 -
Cpe01g02433 313 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Cpe01g02433 313 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Cpe01g02433 313 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Cpe01g02433 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Cpe01g02433 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02433 Cpe13g00986 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02433 Cpe-Chr1:20187854 Cpe03g01311 Cpe-Chr3:10613913 6.65E-07 dispersed
Cpe01g02433 Cpe-Chr1:20187854 Cpe13g00986 Cpe-Chr13:8149902 2.58E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02433 K15121 - csv:101206140 476.478