Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02453 ATGGGTATGAGCAGAGCTGAGGCTACTGTTTCCTGTCTTGTGGCTTCTTTATTGCTTTGGGCTTCTGCAATAAATGGGTTGCTATCTCCCAAAGGTGTAAACTATGAAGTTCAAGCTCTGATGGGTATAAAAGCTTCCCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGACTCTGTTGACCCATGTAGCTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCCTAGGGACCCCAAGCCAGAACCTGTCTGGGACTCTTTCTTCAAGTATTGGGAACTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATCACAGGCCCAATTCCCCCGGAGCTTGGGAGGCTCTCAAAGCTTCAAACACTTGATCTATCCAACAATGTCTTCACTGGGGACATTCCTTCTTCTTTAGCCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGCCTTTCTGGGACAATTCCAATGGCCTTAGCTAACATGACCCACCTTGCATTTCTTGATGTATCATATAATAATATCAGTGGCCCTCTCCCCAGATTTCCCAGCAAAACATTCAACATTGTTGGAAATCCTCTGATCTGTGCGACCGGGACCGAGGCCGGTTGTCACGGGACGACTCTAATGCCCATGTCCATGAATTTGAACTCTACACAAACTGGTTTACCTTCTGTGAGATTGAAGAGTCACAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCTTATGTCTCATTGTTCTTGTATTTGGACTGTTTATATGGTGGAGAAGACGAAACAATCAACCGACGTTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCGCTTGGAAATCTAAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAACTTCAACAGCAAGAACATACTAGGAAAGGGAGGCTTTGGGAATGTTTACAAAGGAATTCTTTCGGATGGAACGGTTGTAGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGTCGAGGCGAGATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTCGCCGTGCACCGTCATCTCCTCAAGCTATACGGCTTCTGCAACACACCTACTGAAAGGCTTCTTGTTTACCCCTATATGTCTAATGGAAGCGTGGCCTCCCGTCTCAAAGGAAAACTGGTATTAGACTGGGGAACAAGGAAGAGAATAGCCATAGGAGCTGCAAGGGGATTGCTATACCTTCATGAACAATGTGATCCAAAGATAATACATAGAGACGTTAAGGCTGCAAACATCTTGCTCGATGACTACTGCGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTCGACCACCAAGATTCACATGTCACAACTGCTGTGAGAGGCACGGTGAAGAAGATTCACTTAGAGAAGAAGCTGGAAGTGCTAGTGGACAAGGATCTGAAAGCAAACTACGACAGAGTTGAGCTAGAAGAGATGGTTCAAGTGGCTCTGTTGTGCACACAATATCTACCGGGACACAGACCAAAGATGTCGGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTCAGATGGGAAGCTTCTCAGAGAGTTGATACCTCAAAGTGCAAACCCCATGACTTCTCTTCATCAGATAGATACTCTGATCTCACAGATGATTCATCGTTGTTGGTTCAAGCCATGGAGCTGTCTGGTCCAAGGTGA 1725 45.45 MGMSRAEATVSCLVASLLLWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSSSIGNLTNLQIVLLQNNNITGPIPPELGRLSKLQTLDLSNNVFTGDIPSSLAHLRSLQYLRLNNNSLSGTIPMALANMTHLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGTEAGCHGTTLMPMSMNLNSTQTGLPSVRLKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRNNQPTFFDVKDQQHEEISLGNLRRFQFRELQIATNNFNSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLKLYGFCNTPTERLLVYPYMSNGSVASRLKGKLVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVKKIHLEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDTSKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20327024 20330854 - Cp4.1LG01g22180.1 Cpe01g02453 463766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02453 574 Gene3D Transferase(Phosphotransferase) domain 1 383 472 - -
Cpe01g02453 574 Gene3D Transferase(Phosphotransferase) domain 1 473 543 - -
Cpe01g02453 574 SUPERFAMILY L domain-like 35 198 - -
Cpe01g02453 574 SMART serkin_6 306 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02453 574 SUPERFAMILY Protein kinase-like (PK-like) 282 524 IPR011009 -
Cpe01g02453 574 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Cpe01g02453 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Cpe01g02453 574 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Cpe01g02453 574 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
Cpe01g02453 574 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 469 574 - -
Cpe01g02453 574 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 469 - -
Cpe01g02453 574 ProSiteProfiles Protein kinase domain profile. 306 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02453 574 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Cpe01g02453 574 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 469 574 - -
Cpe01g02453 574 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 9 469 - -
Cpe01g02453 574 Pfam Protein kinase domain 307 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02453 574 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02453 Cpe13g01002 CCT
Cpe01g02453 Cpe13g01002 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01903 Cpe-Chr1:16231976 Cpe01g02453 Cpe-Chr1:20327024 0 dispersed
Cpe01g02453 Cpe-Chr1:20327024 Cpe09g00254 Cpe-Chr9:1462093 0 dispersed
Cpe01g02453 Cpe-Chr1:20327024 Cpe13g01002 Cpe-Chr13:8267740 0 wgd
Cpe01g02453 Cpe-Chr1:20327024 Cpe19g00162 Cpe-Chr19:1324274 1.35E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62192 PF00069 Pkinase 5.10E-31 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02453 - - csv:101209443 1068.53