Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g02453 | ATGGGTATGAGCAGAGCTGAGGCTACTGTTTCCTGTCTTGTGGCTTCTTTATTGCTTTGGGCTTCTGCAATAAATGGGTTGCTATCTCCCAAAGGTGTAAACTATGAAGTTCAAGCTCTGATGGGTATAAAAGCTTCCCTTCAAGATCCCCATGGTGTGCTTGAGAATTGGGATGGGGACTCTGTTGACCCATGTAGCTGGACTATGGTTACTTGCTCTCCTGAGAGCCTTGTCATTGGCCTAGGGACCCCAAGCCAGAACCTGTCTGGGACTCTTTCTTCAAGTATTGGGAACTTGACAAACCTTCAAATTGTGCTGTTGCAGAACAACAATATCACAGGCCCAATTCCCCCGGAGCTTGGGAGGCTCTCAAAGCTTCAAACACTTGATCTATCCAACAATGTCTTCACTGGGGACATTCCTTCTTCTTTAGCCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGCCTTTCTGGGACAATTCCAATGGCCTTAGCTAACATGACCCACCTTGCATTTCTTGATGTATCATATAATAATATCAGTGGCCCTCTCCCCAGATTTCCCAGCAAAACATTCAACATTGTTGGAAATCCTCTGATCTGTGCGACCGGGACCGAGGCCGGTTGTCACGGGACGACTCTAATGCCCATGTCCATGAATTTGAACTCTACACAAACTGGTTTACCTTCTGTGAGATTGAAGAGTCACAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCTTATGTCTCATTGTTCTTGTATTTGGACTGTTTATATGGTGGAGAAGACGAAACAATCAACCGACGTTCTTCGATGTAAAAGACCAACAACATGAGGAAATTTCGCTTGGAAATCTAAGAAGGTTCCAATTTAGAGAACTTCAGATAGCAACAAACAACTTCAACAGCAAGAACATACTAGGAAAGGGAGGCTTTGGGAATGTTTACAAAGGAATTCTTTCGGATGGAACGGTTGTAGCTGTTAAAAGGCTCAAAGATGGCAATGCAAGTCGAGGCGAGATCCAGTTTCAGACTGAAGTTGAGATGATCAGCCTCGCCGTGCACCGTCATCTCCTCAAGCTATACGGCTTCTGCAACACACCTACTGAAAGGCTTCTTGTTTACCCCTATATGTCTAATGGAAGCGTGGCCTCCCGTCTCAAAGGAAAACTGGTATTAGACTGGGGAACAAGGAAGAGAATAGCCATAGGAGCTGCAAGGGGATTGCTATACCTTCATGAACAATGTGATCCAAAGATAATACATAGAGACGTTAAGGCTGCAAACATCTTGCTCGATGACTACTGCGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTCGACCACCAAGATTCACATGTCACAACTGCTGTGAGAGGCACGGTGAAGAAGATTCACTTAGAGAAGAAGCTGGAAGTGCTAGTGGACAAGGATCTGAAAGCAAACTACGACAGAGTTGAGCTAGAAGAGATGGTTCAAGTGGCTCTGTTGTGCACACAATATCTACCGGGACACAGACCAAAGATGTCGGAAGTTGTCAGAATGCTTGAAGGAGAAGGGCTTGCTGTCAGATGGGAAGCTTCTCAGAGAGTTGATACCTCAAAGTGCAAACCCCATGACTTCTCTTCATCAGATAGATACTCTGATCTCACAGATGATTCATCGTTGTTGGTTCAAGCCATGGAGCTGTCTGGTCCAAGGTGA | 1725 | 45.45 | MGMSRAEATVSCLVASLLLWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPESLVIGLGTPSQNLSGTLSSSIGNLTNLQIVLLQNNNITGPIPPELGRLSKLQTLDLSNNVFTGDIPSSLAHLRSLQYLRLNNNSLSGTIPMALANMTHLAFLDVSYNNISGPLPRFPSKTFNIVGNPLICATGTEAGCHGTTLMPMSMNLNSTQTGLPSVRLKSHKMALTFGLSLACLCLIVLVFGLFIWWRRRNNQPTFFDVKDQQHEEISLGNLRRFQFRELQIATNNFNSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGEIQFQTEVEMISLAVHRHLLKLYGFCNTPTERLLVYPYMSNGSVASRLKGKLVLDWGTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVKKIHLEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGEGLAVRWEASQRVDTSKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR | 574 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 20327024 | 20330854 | - | Cp4.1LG01g22180.1 | Cpe01g02453 | 463766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g02453 | 574 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 472 | - | - | |
Cpe01g02453 | 574 | Gene3D | Transferase(Phosphotransferase) domain 1 | 473 | 543 | - | - | |
Cpe01g02453 | 574 | SUPERFAMILY | L domain-like | 35 | 198 | - | - | |
Cpe01g02453 | 574 | SMART | serkin_6 | 306 | 523 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g02453 | 574 | SUPERFAMILY | Protein kinase-like (PK-like) | 282 | 524 | IPR011009 | - | |
Cpe01g02453 | 574 | Pfam | Leucine rich repeat N-terminal domain | 34 | 73 | IPR013210 | - | |
Cpe01g02453 | 574 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 425 | 437 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe01g02453 | 574 | ProSitePatterns | Protein kinases ATP-binding region signature. | 312 | 334 | IPR017441 | GO:0005524 | |
Cpe01g02453 | 574 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 382 | - | - | |
Cpe01g02453 | 574 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 469 | 574 | - | - | |
Cpe01g02453 | 574 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 9 | 469 | - | - | |
Cpe01g02453 | 574 | ProSiteProfiles | Protein kinase domain profile. | 306 | 574 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g02453 | 574 | Pfam | Leucine rich repeat | 125 | 184 | IPR001611 | GO:0005515 | |
Cpe01g02453 | 574 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 469 | 574 | - | - | |
Cpe01g02453 | 574 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 9 | 469 | - | - | |
Cpe01g02453 | 574 | Pfam | Protein kinase domain | 307 | 468 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g02453 | 574 | Gene3D | Ribonuclease Inhibitor | 33 | 215 | IPR032675 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g02453 | Cpe13g01002 | CCT | |
Cpe01g02453 | Cpe13g01002 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01903 | Cpe-Chr1:16231976 | Cpe01g02453 | Cpe-Chr1:20327024 | 0 | dispersed | |
Cpe01g02453 | Cpe-Chr1:20327024 | Cpe09g00254 | Cpe-Chr9:1462093 | 0 | dispersed | |
Cpe01g02453 | Cpe-Chr1:20327024 | Cpe13g01002 | Cpe-Chr13:8267740 | 0 | wgd | |
Cpe01g02453 | Cpe-Chr1:20327024 | Cpe19g00162 | Cpe-Chr19:1324274 | 1.35E-09 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62192 | PF00069 | Pkinase | 5.10E-31 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g02453 | - | - | csv:101209443 | 1068.53 |