Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02464 ATGCAGCTGAAATTGGCTTCGAATTTGCCCACGATTTCCTCCATTGAAGATCCTAATACTCCAATTCTTTCCCCCACTATCTCATCAGCTGAAGAACCAATGGCGGTTCCCGCGGTTCAGTTCCCGATCTTCATGGCCGTGAGAGTGCTCGGGATGGTTGTGGCAACTCTCGTCTTCATTTGGACCTTGCACTTCCGTGGAGGATTGGCGCTTATCTCAGATAACAAGGATCTCATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATACTCCTAAATGGTGAAGTTAATTCTCCTACCATTCTGGTGCGTTCAATGGTTCTGTTCACCGTGCTTAGATGTATTGATGCAGCAATGTTGGCATACAAGACAGTCTCAGGAACCAAAAATTTCAGAAAACTAGTTCATCTTGCAGTACAGTTTGTTGCATTCTGTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTTCACAACGACAAAGGAATCGAGAACTTTTACAGTTTGCATTCATGGTTGGGTCTAGTTTCGATCTTTCTGTTCGGCTTCCAGTGGACTGCAGGATTTGTAACCTTTTGGTACCCAGGCGGCTCCAGAAACAGCCGATCGACTCTATTGCCATGGCATGTTTTCTTTGGTGTTTACATATATGGCCTTTCCATTGCTACAGCTGTTACTGGCTTGTTAGAAAAAGCTACATTTCTTCAAGTCAGCAAGGTGATTTTACGCTATTCCAACGAGGCGTTGCTGTTAAATTCGTTGGGTCTCCTCATTGTTCTTCTGGGTGGTCTTGTAATTCTCGCGGTTATCGCTCCATCGAGTAGCAAAGGCGACATTTTCAGGGGGCCAGCTGAATAG 864 45.14 MQLKLASNLPTISSIEDPNTPILSPTISSAEEPMAVPAVQFPIFMAVRVLGMVVATLVFIWTLHFRGGLALISDNKDLIFNVHPVLMVIGLILLNGEVNSPTILVRSMVLFTVLRCIDAAMLAYKTVSGTKNFRKLVHLAVQFVAFCLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSIFLFGFQWTAGFVTFWYPGGSRNSRSTLLPWHVFFGVYIYGLSIATAVTGLLEKATFLQVSKVILRYSNEALLLNSLGLLIVLLGGLVILAVIAPSSSKGDIFRGPAE 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20393378 20397545 + Cp4.1LG01g22250.1 Cpe01g02464 463777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02464 287 SMART 561_7 82 230 IPR006593 -
Cpe01g02464 287 PANTHER CYTOCHROME B561-RELATED 101 283 IPR043205 GO:0016491
Cpe01g02464 287 PANTHER CYTOCHROME B561-RELATED 34 98 IPR043205 GO:0016491
Cpe01g02464 287 CDD Cyt_b561_ACYB-1_like 73 238 - -
Cpe01g02464 287 Pfam Eukaryotic cytochrome b561 110 236 IPR006593 -
Cpe01g02464 287 PANTHER B561, PUTATIVE-RELATED 101 283 - -
Cpe01g02464 287 PANTHER B561, PUTATIVE-RELATED 34 98 - -
Cpe01g02464 287 Gene3D - 34 284 - -
Cpe01g02464 287 ProSiteProfiles Cytochrome b561 domain profile. 46 272 IPR006593 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02464 Cpe13g01013 CCT
Cpe01g02464 Cpe13g01013 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02464 Cpe-Chr1:20393378 Cpe15g00317 Cpe-Chr15:4141089 9.57E-62 dispersed
Cpe01g02464 Cpe-Chr1:20393378 Cpe13g01013 Cpe-Chr13:8342520 3.75E-35 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02464 K08360 - csv:101212633 385.185