Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02521 ATGGATTTTCCTGCAACTTTTCGCGGGAATTCCTTTCCCTTGTCTCATTACAGTTCTTGCTGCTACATTCGTTTCCATCCTAGTTTGATTTCGTTTGCTGGCTTGAAGGAGCAACGGATTTCTCATCGCGGCCTTAAGCTTTATCAGTTTGCCAGCCGTGCAAAGCGAGGGGTTGCTTGTAGAGTTACTGAAACGCAGAATGAACCAGATGGCACTAACGATAAGGAAAAAGATGGCTCTGAAGGTGGAGATCAGCCATCTCCCTCCGACTCCCTCTCAGAAGATAAAATTCAACTCGATTCTCAGGTTGTTGATGAAGTCAACAATGCTGAAAATAAGGACCAAGGTGACATCCAGGATATTGACAATGTAGAAGTTGCTAGTGGGTCTCCACTTCCAGGACTAAAGGGTGGAGTGTTGTTTAAAGGAAATCTGCGAGGAGAGGCTGCTAAGAGCTATGAAAAGATAACAAAGAGAATGCAGGATAACTTTGGGGATGTATATAAGCTTTTTCTTTTAATTAATCCAGAGGATGATAAACCTGTAGCTGTTGTTATTCCAAGAAAGACCTTACAACCAGAGACAACAGCTGTCCCAGAATGGTTTGCTGCCGCAGCGTTTGGACTGGTTACTGTATTTACTCTACTTCTCCGAAATGTCCCCGCATTGCAATCCAACTTACTATCGACTTTTGATAATCTTGACTTGCTTAAAGATGGACTATCTGGTGCCTTAGTAACTGCACTTGTTTTAGGAGTGCATGAACTCGGCCATATATTAGCTGCTGGAGATAGAGTTAAGTTTGGGATTCCATACTTTGTTCCTAGTTGGCAGATAGGCTCCTTTGGTGCAATCACACGGATCCTAAATATTGTACCCAAGCGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGNGCGAAGATCTGCTGAAGGTGGCAGTAGCAGGACCATTAGCTGGATTTTCTGTGGGCTTCCTTCTTTACATTCTAGGTTTCATCTTGCCACCTAGTGATGGCATTGGAGTTATCGTTGATTCATCTGTGTTTCATGAGTCATTTCTTGCCGGTGGCCTTGGTAATCATCTTTTCTTTTATACGTTGGATCTTTACTAG 1218 43.35 MDFPATFRGNSFPLSHYSSCCYIRFHPSLISFAGLKEQRISHRGLKLYQFASRAKRGVACRVTETQNEPDGTNDKEKDGSEGGDQPSPSDSLSEDKIQLDSQVVDEVNNAENKDQGDIQDIDNVEVASGSPLPGLKGGVLFKGNLRGEAAKSYEKITKRMQDNFGDVYKLFLLINPEDDKPVAVVIPRKTLQPETTAVPEWFAAAAFGLVTVFTLLLRNVPALQSNLLSTFDNLDLLKDGLSGALVTALVLGVHELGHILAAGDRVKFGIPYFVPSWQIGSFGAITRILNIVPKREDLLKVAVAGPLAGFSVGFLLYILGFILPPSDGIGVIVDSSVFHEXEDLLKVAVAGPLAGFSVGFLLYILGFILPPSDGIGVIVDSSVFHESFLAGGLGNHLFFYTLDLY 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20687123 20691111 - Cp4.1LG01g25350.1 Cpe01g02521 463834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED 1 136 - -
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY1 342 396 IPR044838 -
Cpe01g02521 405 MobiDBLite consensus disorder prediction 60 118 - -
Cpe01g02521 405 MobiDBLite consensus disorder prediction 68 83 - -
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY1 1 136 IPR044838 -
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED 136 340 - -
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY2, CHLOROPLASTIC-RELATED 342 396 - -
Cpe01g02521 405 PANTHER ZINC METALLOPROTEASE EGY1 136 340 IPR044838 -
Cpe01g02521 405 MobiDBLite consensus disorder prediction 84 109 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00141 Cpe01g02521 CCT
Cpe01g01051 Cpe01g02521 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02521 Cpe-Chr1:20687123 Cpe10g01063 Cpe-Chr10:6362689 2.29E-21 dispersed
Cpe01g02519 Cpe-Chr1:20666138 Cpe01g02521 Cpe-Chr1:20687123 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02521 K25380 - csv:101217814 560.451