Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02531 ATGGTTCGAGTTCTTCCTCCTTTCTATTCCACGATCCGAGAGCAGCTGGATTTCCTTCCTCACTTCGCCCCAAGAATAAACTCTCGGATCTTTCCTATTGGACTTGAAATTCGCATTTCTTTTTCTACCATTTTGCCTCCGTCGATACCAACAATCCTCGTTGAGAAGGGAATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGCTGTCCGGCATTGTGCTACTTCTTCAGGGTATAACGAGCCCAAGTTGGCGGCTATTATGGCGTCATTCATCATTCAGAAACCTCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTAAAAACGCTTGAGAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAGCATCAAAAGGACTATGTAGATATGTATCGCACAACAGATCAAGAGAGAGACGATATTGAACATGAGGTAACTGCATTCATCAAAGCATGCCAAGAACAAATCGATATCCTAAAAAACAACATTAATGGGGATGACGCACACTCAAAGAGCTGGCTTGGTGCTAGGACTGATGATGCTAATGCCGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCAGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATAATAAACAAAGCAGTACCAAGAAGAAAACCCAACCAAGTAAATAAACCACGTTCTGCAAATGCCCCCAACTATAATAATATGGAGCTGAGGGAACCTGATACTTTTGAGCATCAACCTGTCCGAGCCCAACAGCAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACCAGTCTTCTTGATGCAGTCCAGGAAACAGAAACTAAGATGGTAGAGATGTCTGCTTTAAATCACCTAATGTCTACACATGTTTTGCAGCAAGCACAACAAATCGAATTTCTTTATGAACAGGCTGTTGAAGCTACAAAGAACGTCGAGCTTGGTAATAAAGAACTTGCCCAAGCAATTCAGCGGAATAGCAGCAGTAGAACCTTCCTTCTGCTCTTTCTATTTGTGCTAACATTTTCAATTCTCTTTCTTGATTGGTATAGTTGA 1101 41.78 MVRVLPPFYSTIREQLDFLPHFAPRINSRIFPIGLEIRISFSTILPPSIPTILVEKGMAKFRDRTEDFKDAVRHCATSSGYNEPKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDDIEHEVTAFIKACQEQIDILKNNINGDDAHSKSWLGARTDDANADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIINKAVPRRKPNQVNKPRSANAPNYNNMELREPDTFEHQPVRAQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELAQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20745792 20749188 - Cp4.1LG01g25320.1 Cpe01g02531 463844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02531 366 Gene3D - 268 363 - -
Cpe01g02531 366 SUPERFAMILY t-snare proteins 118 330 IPR010989 GO:0016020|GO:0016192
Cpe01g02531 366 MobiDBLite consensus disorder prediction 228 247 - -
Cpe01g02531 366 PANTHER SYNTAXIN-18 62 366 - -
Cpe01g02531 366 PANTHER SYNTAXIN-18 62 366 - -
Cpe01g02531 366 Pfam SNARE-complex protein Syntaxin-18 N-terminus 63 143 IPR019529 -
Cpe01g02531 366 MobiDBLite consensus disorder prediction 233 247 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02531 Cpe13g01079 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02531 Cpe-Chr1:20745792 Cpe13g01079 Cpe-Chr13:8727540 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02531 K08492 - csv:101207161 557.755