Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02556 ATGAGTTTTGTTTTCCGTGGAACACGAGTTCCAGACATAGAAAATGGTCTCCCTGGATTTATACCTGAGCGGCGTGCAATGCGTGTTCATGCAGCACGTCCTGTTAACTCGAACTCACTTGCCTTTCTTGTCACAGTTCTTCTGTTATTCATGATATTGAACTCTCACCAGATGTCACCAAACTTTCTGCTCTGGCTTGTGCTTGGTGTGTTTTTAATGGCTACAACATTAAGGATGTACGCGACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGTCTTCTGGGTCACACTGAATTGAGGTTGCATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATAGGGAATTTGATGATTTAGACTATGAAACTTTGAGAGCTTTGGATTCTGACAATGTTCCAACAACACCGTCAATGAGCGAGGAACAAATAAATGCTCTTCCTGTCCATAAATACAAGGTTTCTGGTCCTCAAAGCGACCCTGCTGCGAATCAACAGGCTTCATCTTCAGAATCCAATGAGAAGAGACCAGATTCAGTCAATGCCGTTGGCGGTACCAAGTCCTTACAGGATGAACTTACATGCAGTGTTTGCTTAGAGCAATTCCATGCGAACTGCATAGATCCGTGGCTGGGGCAGCAGGGAACATGTCCTGTTTGCAAATTCAGAGCGGTGCCCGCGTGGTCGGAGCAGGGGCAAGGGGAAACCGATGCTTATATGGTTTAA 783 46.23 MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDPAANQQASSSESNEKRPDSVNAVGGTKSLQDELTCSVCLEQFHANCIDPWLGQQGTCPVCKFRAVPAWSEQGQGETDAYMV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20846319 20850143 + Cp4.1LG01g25530.1 Cpe01g02556 463869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02556 260 PANTHER TARGET OF ERK KINASE MPK-1 1 259 - -
Cpe01g02556 260 SUPERFAMILY RING/U-box 208 250 - -
Cpe01g02556 260 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 150 245 IPR013083 -
Cpe01g02556 260 MobiDBLite consensus disorder prediction 171 203 - -
Cpe01g02556 260 MobiDBLite consensus disorder prediction 177 203 - -
Cpe01g02556 260 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 259 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02556 Cpe13g01106 CCT
Cpe01g02556 Cpe13g01106 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02556 Cpe-Chr1:20846319 Cpe03g01575 Cpe-Chr3:12184187 8.21E-07 dispersed
Cpe01g02556 Cpe-Chr1:20846319 Cpe13g01106 Cpe-Chr13:8898256 4.97E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02556 K16283 - csv:101216306 440.654