Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02578 ATGGAAGTTGAAGCACAATCGGAGTTTCCGTACTGGAAGCCTTTCCAACGGAGGTTCGACCCTGATTCTCCCTTCTTCGCCTCTGGAAATGCCGAGCGCGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTCCAGCTTCATAATATGGTAGTTGATGTCGGCAGGAAAATCTTTTGCCCAATAGTCGGTTGTGGTGCGCACTTGAAATCGCTGGATGACTTTGAAGATCACTACAATTCACGGCATACTGCCTCTTGTTCAGTTTGCCCAAGAGTATATCCAACATCACGACTGCTTAGTCTGCATGTGTCTGAGGCACACGACTCGTTCTTTCAAGCCAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAGAGCTACAAAAGCAGGCAGCAGCATCTAGTGGACAAGCATAAGTTTTCTGCTTCATTTGAATTCTTTAAGAAGGCTCCTCCTTCTAAGAAACAAAGACAGAAATTATATCGAAAACAAGTTCTTCAACCAAGGGAAGAAACTTCCAAAATGGAAGTCGAGAATGAAACTATGGATGGCCTCATTTTGGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCATCATCAGTCAGCTTTGGCCGAAGGCACACTCGAGGGTTAACGTTTGTTCCTCGAGCAGTTCAGCGTGAAAAGGTTTCAGACTCCTCAACAGCAGGATCAAACAAATAA 750 44.53 MEVEAQSEFPYWKPFQRRFDPDSPFFASGNAEREILAKQVALDLTEDEKLQLHNMVVDVGRKIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAPPSKKQRQKLYRKQVLQPREETSKMEVENETMDGLILGVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVQREKVSDSSTAGSNK 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20957673 20959761 - Cp4.1LG01g25710.1 Cpe01g02578 463891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02578 249 MobiDBLite consensus disorder prediction 207 249 - -
Cpe01g02578 249 MobiDBLite consensus disorder prediction 207 222 - -
Cpe01g02578 249 PANTHER ZINC FINGER PROTEIN 511 4 238 - -
Cpe01g02578 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
Cpe01g02578 249 ProSitePatterns Zinc finger C2H2 type domain signature. 130 153 IPR013087 -
Cpe01g02578 249 SMART c2h2final6 63 88 IPR013087 -
Cpe01g02578 249 SMART c2h2final6 90 113 IPR013087 -
Cpe01g02578 249 SMART c2h2final6 128 153 IPR013087 -
Cpe01g02578 249 PANTHER UNCHARACTERIZED 4 238 IPR039258 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48960 None None None None Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02578 - - csv:101212859 448.358