Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02580 ATGGGTCGGGTGAATGAGAAGCTTGTGGCCTTTTTGAACAACCGATGGTTGGTTTTTGTAGCTGCAATATGGATACAATCTTGCGCTGGAATTGGGTATCTTTTCGGAAGCATATCGCCGGTGATCAAGACGAATTTGAGTTATAATCAGAAGCAAATTGCGCGGCTCGGTGTCGCGAAGGATCTTGGCGATAGCGTTGGCATTTTGGCCGGAACCTTGTCGGAGATATTGCCGTTCTGGGGAACTTTATTAGTCGGTGCTCTCAATAACTTTATTGGGTATGGTTGGGTTTGGCTCATCGTCACTGGTCGAGCTCCTGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTGTTTGTGGGAACGAATGGGGAGACATACTTCAACACAGTTTCTCTGGTTTCTTGCGTACAAAACTTCCCGAAGAGTAGGGGTCCGGTGGTCGGGATCTTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAAATATATGCAATCATGCATTTCCCTGATTCAGCCAATCTTATATTCATGATAGCAGTAGGTCCTGCACTTGTGGCTATTGGTATGATGTTCTTTATCCGACCCGTTGCTGGTCATCGACAAGTGAGGCCGTCCGATGGCATGAGCTTTAGTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCGTATCTTATGGGAGTCATGCTTGTTGAGGATCTTGTTGATTTGAGCCCCACTGTGATAGCCATTTTCACTGCTGTTATGTTTGTTATCCTTCTTACTCCCTTTTTGATTCCTGTGATATTGACTTTTAGCTCGGAAACAACGGCATATCCCGAGCAAGAGGCTCTCCTACAACAGTCACCTAAACATGAACCTGCTAGATCTGAACCAGATGGTCATGAAGTGATATTTAGTGAGGTCGAAGATGAGAAGTCGGAGGGAGAGGACTTACTTCCTGCGTCGGAGCGACAAAAACGCATTGCTCAGTTGCAAGCAAGACTGTTGCAAGCAGCTGCAGAAGGAGCAGTACGAGTCAAGAGGAGAAAGGGTCCTCGTAGAGGGGAGGACTTTACTTTGGGTCAAGCTTTGATCAAAGCAGACTTTTGGCTTATATTCTTCTCCCTTCTCCTTGGCTCTGGAACTGGGTTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTNCGTTGGGTCAAGCTTTGATCAAAGCAGACTTTTGGCTTATATTCTTCTCCCTTCTCCTTGGCTCTGGAACAGGGTTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGCTATGATAATACGCATATTTTTGTATCCCTGATCAGCATATGGAACTTTCTTGGCCGGGTTGGTGGCGGTTACTTCTCTGAGATCGTTGTGAGAGATTATGCTTATCCAAGGCCCATTGCTATGGCAACTGCACAATTCCTTATGATATTTGGGCATATCTTCATCGGTATGGGATGGCCCGGGGCAATAGATTATGCTTATCCAAGGCCCATTGCTATGGCAACTGCACAATTCCTTATGATATTTGGGCATATCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGCACACTCATCACGGGGCTCGGATACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCGGAATTGTTTGGGTTGAAAAAGTTTGGTGCTTTATACAACTTCCTGACTCTCTCAACTCCGATGGGATCTCTGATATTTTCGGGCCTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCACATAATGGTCTCTCACAGCTGCAGAGCTCCTCGTCAGTTTGGTTCAGCAGACTTCATGTCGATGCACCGCTCAAGTGCGACGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCTATTGCAGGCATGTTAAGTTTGATTTTGGTGCACCGGACAAAAGGTGTGTACTACAACCTCTATGGAAAATCCCGAGCTTCGACGCTCTCCTAG 2001 46.78 MGRVNEKLVAFLNNRWLVFVAAIWIQSCAGIGYLFGSISPVIKTNLSYNQKQIARLGVAKDLGDSVGILAGTLSEILPFWGTLLVGALNNFIGYGWVWLIVTGRAPVLPLWAMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHFPDSANLIFMIAVGPALVAIGMMFFIRPVAGHRQVRPSDGMSFSSVYGVCLLLAAYLMGVMLVEDLVDLSPTVIAIFTAVMFVILLTPFLIPVILTFSSETTAYPEQEALLQQSPKHEPARSEPDGHEVIFSEVEDEKSEGEDLLPASERQKRIAQLQARLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSXLGQALIKADFWLIFFSLLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYFSEIVVRDYAYPRPIAMATAQFLMIFGHIFIGMGWPGAIDYAYPRPIAMATAQFLMIFGHIFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFLTLSTPMGSLIFSGLIASSIYDSEAEKQAHNGLSQLQSSSSVWFSRLHVDAPLKCDGAICFFLTCMIMAGFCAIAGMLSLILVHRTKGVYYNLYGKSRASTLS 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20962088 20965817 - Cp4.1LG01g25730.1 Cpe01g02580 463893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02580 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cpe01g02580 666 SUPERFAMILY MFS general substrate transporter 9 202 IPR036259 -
Cpe01g02580 666 SUPERFAMILY MFS general substrate transporter 212 651 IPR036259 -
Cpe01g02580 666 MobiDBLite consensus disorder prediction 287 302 - -
Cpe01g02580 666 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 495 661 - -
Cpe01g02580 666 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 391 - -
Cpe01g02580 666 CDD MFS_Mch1p_like 15 638 - -
Cpe01g02580 666 Pfam Nodulin-like 15 262 IPR010658 -
Cpe01g02580 666 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 393 494 - -
Cpe01g02580 666 MobiDBLite consensus disorder prediction 277 302 - -
Cpe01g02580 666 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 495 661 - -
Cpe01g02580 666 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 393 494 - -
Cpe01g02580 666 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 391 - -
Cpe01g02580 666 Coils Coil 316 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02580 Cpe-Chr1:20962088 Cpe03g01155 Cpe-Chr3:9489385 2.72E-103 dispersed
Cpe01g02580 Cpe-Chr1:20962088 Cpe13g01125 Cpe-Chr13:8999898 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02580 - - csv:101211655 989.178