Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00025 ATGTTCTGGATTCTCTGTTCCGCCATACGAGCAACTGATTTAGCATCCAGCGTATACTTCGTCTACCAATCGTTCCCATACCTTTCAGTAGCAGTTTCTTACTGCGGCAGCTTCGATTCAGGCCACAGACTTCTCAGGCAAGAAGCACAAATGAGTTTCATTTGGCTTCTCTCGTTGCTATCTCTTTATTGTGGTATATTCCCTGTTGGGCTTGGTAAGAACATCTCCTCAAGACCATCGGTTGTGAACATTGGAGCTATTTTTTCTTTTGATTCTACCATTGGAAAAGTTGCCAAGATTGCCATTGAAGAAGCTGTGAAAGATGTGAATGCGGATCCTACCATTCTTCCCACAACCAACCTTTGGTTACAAATGCAAAATTCCAACTGTAGTGGGTTCTTAGGCATGGTCGAAGTTTTGCAACTTATGGAGAATGCAACCGTCGCCATCATAGGCCCCCAATCTTCTGTGGTTGCCCACATTTCATCCCAAATTGCAACCGAGTTCCAAGTTCCTCTAGTCTCATTTTCAGCTACAGATCCTACTCTCTCCGCCCTTCAGTTTCCCTTTTTTGTGAGGGCTGCACAGAGTGATTTGTTTCAAATGACTGCAGTTGCTGAGATTATTGAGTACTATGATTGGAAAGAGGTTATCGCTATATACGTCGATGATGATTATGGGTGGAATGGTATTGCAGCATTGGATGATAAACTTTCTGAAAAACGTTGTAAAATCACATACAAGGTGGGTATTAGTCCCGAAACTGCGGTAAACCAAGTCCAAGTTATGGATCAACTTGTTAAGATTGCATTGATGGAATCAAGAGTTATGGTTCTCCATGTGAACCCCAAATTAGGCACTTTAGTCTTTTCAGTGGCTAAATCCCTTCAAATGATGGGCAATGGATATGTATGGATAGCAACTGATTGGCTTTCGTCTCTACTAGATAGTGTTGTTCCCCCACCTCCTGAGACCTTGGACTCGATGCAAGGAGTTCTTTCTTTACGCCAGCACACAGCAGAGTCAAATAAAAAGAAAGCTTTTGTTTCCAGGTGGAATAAGTTAACTGGTGGCTCTTTAGGTCTGAATGCTTATGGTCTCTATGCTTATGACTCTGTTTGGGTGGTTGCTCATGCCATTGACAAATTTTTTAATCAAGGTGGGGTCATTACACATTCTAATGATTCCCGGCTGAATTTCAATGGAAACGGTGATCTTCATCTTGAAGCTATGACTATCTTCGATGGTGGAAATCATCTGCTGAATAACATATTGGAGAGTGACCTTGTTGGTTTGACGGGTGCCCTTAAGTTCGATTCTGGTAGATCCCTTGTTCATCCTGCATATGATATTATTAGCGTTATCGGGACTGGGTCAAGAAGGGTTGGCTACTGGTCTAACTACTCTGGTCTATCAATTGAAGCTCCTGAGATACTCTATTCCAAACCACCTAACCGTTCACACGCAAATCAGAAGCTGTACGAGGTTATATGGCCAGGAAATACAGTGGAAAAGCCTCGAGGATGGGTGTTCCCAAACAACGGGAAGCTACTAAACATTGGAGTGCCACTTCGGGCCAGTTTCAAGGAGTTTGTATCACAAATCAAAGGGTCCGACAATTTCCAAGGTTTCTGCATTGATGTGTTTACAGCTGCTGTAAGCTTGTTACCTTACGCTGTCCCGCACCAATTCATAGCCTTTGGCAATGGCCATGAGAATCCGAATTACACAGATCTTGTATATGGGATAACAACTGGCAAATTTGATGCCGTTGTTGGAGACATAGCCATTGTCACAAGCCGTACAAGGCTTGTGGATTTTACTCTGCCATATACTGCTTCTGGACTAGTTGTTGTGGCCCCACTCAAAAAACTGAACACTGGTGCTTGGGCTTTCTTGCATCCATTTTCTCCAGCCATGTGGATGGTTACTGCTGCTTTCTTCCTTTTTATTGGAATAGTCGTCTGGATTCTGGAGCATAGGACGAACGATGAATTCCGAGGCCCACCGAGAAGACAATGCATTACAATTTTATGGTTTAGCTTCTCAACTCTATTTTTTGCCCATAAGGAGAACACAGTTAGCACTCTCGGCCGCTTCGTGCTGATCATATGGCTGTTTGTGGTTTTGATTATAAATTCTAGCTACACTGCAAGCTTAACATCCATTCTCACGGTGCAGCAGCTATATTCTCCAATCACAGGAATAGAAACCTTGAGGGAAATTGATGAACCGATTGGTTTCCAAGTTGGATCTTTTGCTGAACGTTATCTGAGTGAGGAGCTGAACGTGTCTAGATCTAGGCTTATTCCTCTTGGATCACCGGAAGAATATGCCAAGGCACTTGATCTTGGCCCTGGCAAGGAGGGAGGCGTTGCTGCTGTAGTTGATGAACTTCTATATGTAGAAAATTTCATCTCTAGAGAGTGTAAATTCAGAGTTGTTGGTCAAGAGTTTACCAAAAGCGGCTGGGGTTTCGCATTCCCACGAGACTCTCCATTGGCTGTAGACATGTCAACTGCCATTTTGCAGCTATCCGAGAACGGCGATCTGCAACGGATACACGACAAATGGGTTGTGAAAAGTGCTTGCACCTCAGACAGTACAGATCTCGAATCAGACTCGCTTCAACTTAAGAGCTTCTGGGGTCTCTTTCTTATCTGTGGGACAGTGTGTTTCATTGCCCTTGCCATATACTGCTTTCAGATTATTCGTCAGCTATACCATTCTGATTCAAAAGAATCTGATCTGTCTAGCAGTAGTGGATCGCATCCGAACCGTCTTCGACGAATCATGTCGTTGTTTGATGAGAAGAAAGAACCAAGGCAAAGCAAACGAAGGAAAGTTGAAAAATCGTCCGAAAATGATAAGAATGATGGTAATTTGGAGGTAAATCCTTGA 2901 43.36 MFWILCSAIRATDLASSVYFVYQSFPYLSVAVSYCGSFDSGHRLLRQEAQMSFIWLLSLLSLYCGIFPVGLGKNISSRPSVVNIGAIFSFDSTIGKVAKIAIEEAVKDVNADPTILPTTNLWLQMQNSNCSGFLGMVEVLQLMENATVAIIGPQSSVVAHISSQIATEFQVPLVSFSATDPTLSALQFPFFVRAAQSDLFQMTAVAEIIEYYDWKEVIAIYVDDDYGWNGIAALDDKLSEKRCKITYKVGISPETAVNQVQVMDQLVKIALMESRVMVLHVNPKLGTLVFSVAKSLQMMGNGYVWIATDWLSSLLDSVVPPPPETLDSMQGVLSLRQHTAESNKKKAFVSRWNKLTGGSLGLNAYGLYAYDSVWVVAHAIDKFFNQGGVITHSNDSRLNFNGNGDLHLEAMTIFDGGNHLLNNILESDLVGLTGALKFDSGRSLVHPAYDIISVIGTGSRRVGYWSNYSGLSIEAPEILYSKPPNRSHANQKLYEVIWPGNTVEKPRGWVFPNNGKLLNIGVPLRASFKEFVSQIKGSDNFQGFCIDVFTAAVSLLPYAVPHQFIAFGNGHENPNYTDLVYGITTGKFDAVVGDIAIVTSRTRLVDFTLPYTASGLVVVAPLKKLNTGAWAFLHPFSPAMWMVTAAFFLFIGIVVWILEHRTNDEFRGPPRRQCITILWFSFSTLFFAHKENTVSTLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLYSPITGIETLREIDEPIGFQVGSFAERYLSEELNVSRSRLIPLGSPEEYAKALDLGPGKEGGVAAVVDELLYVENFISRECKFRVVGQEFTKSGWGFAFPRDSPLAVDMSTAILQLSENGDLQRIHDKWVVKSACTSDSTDLESDSLQLKSFWGLFLICGTVCFIALAIYCFQIIRQLYHSDSKESDLSSSSGSHPNRLRRIMSLFDEKKEPRQSKRRKVEKSSENDKNDGNLEVNP 966
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 134377 139980 - Cp4.1LG02g08280.1 Cpe02g00025 463974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00025 966 Gene3D - 790 824 - -
Cpe02g00025 966 Gene3D - 628 765 - -
Cpe02g00025 966 PIRSF IGluLR_plant 48 965 IPR017103 -
Cpe02g00025 966 SMART GluR_14 519 861 IPR001320 GO:0015276|GO:0016020
Cpe02g00025 966 MobiDBLite consensus disorder prediction 915 966 - -
Cpe02g00025 966 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 61 964 - -
Cpe02g00025 966 MobiDBLite consensus disorder prediction 930 958 - -
Cpe02g00025 966 Pfam Receptor family ligand binding region 100 455 IPR001828 -
Cpe02g00025 966 Gene3D - 100 446 - -
Cpe02g00025 966 Pfam Bacterial extracellular solute-binding proteins, family 3 538 859 IPR001638 -
Cpe02g00025 966 SUPERFAMILY Periplasmic binding protein-like II 496 861 - -
Cpe02g00025 966 CDD GluR_Plant 516 858 - -
Cpe02g00025 966 Gene3D - 197 471 - -
Cpe02g00025 966 SUPERFAMILY Periplasmic binding protein-like I 77 510 IPR028082 -
Cpe02g00025 966 Gene3D - 825 858 - -
Cpe02g00025 966 CDD PBP1_GABAb_receptor_plant 83 472 IPR044440 -
Cpe02g00025 966 PANTHER GLUTAMATE RECEPTOR 3.3 61 964 - -
Cpe02g00025 966 Pfam Ligand-gated ion channel 860 890 IPR001320 GO:0015276|GO:0016020
Cpe02g00025 966 Gene3D - 524 627 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00025 Cpe06g00011 CCT
Cpe02g00025 Cpe06g00011 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00025 Cpe-Chr2:134377 Cpe16g00445 Cpe-Chr16:5732335 0 dispersed
Cpe18g00601 Cpe-Chr18:6368971 Cpe02g00025 Cpe-Chr2:134377 4.56E-144 dispersed
Cpe10g00717 Cpe-Chr10:4100639 Cpe02g00025 Cpe-Chr2:134377 0 wgd
Cpe15g00647 Cpe-Chr15:7172461 Cpe02g00025 Cpe-Chr2:134377 0 wgd
Cpe19g00900 Cpe-Chr19:6550892 Cpe02g00025 Cpe-Chr2:134377 0 wgd
Cpe02g00025 Cpe-Chr2:134377 Cpe04g00635 Cpe-Chr4:6560466 0 wgd
Cpe02g00025 Cpe-Chr2:134377 Cpe06g00011 Cpe-Chr6:38883 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00025 K05387 - csv:101204862 1594.33