Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00026 ATGGCTACGGGTATAGATTTTTCACCTCCCTTTGCCCTACTAGAAGGCGGCGGATACAGTAAGGACAATGTATCAGCGACAAATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCACTGGGAAACCTCCCCGACACCTCTCGGTTTCGCGGCATAGTGTGAGCTCTATAAAGCTGCTAGACCAAGCTGATTTAAGCTTGGATGCTGATACTCTTGGGAATAATTCGCCTGATGGGAAAGCAGGATTCTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAGCAGTACATGGAAGATGAGCACATATGCATAGATGATCTTGTAGAACACATTCATGCATGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGATGCAGCAGCTTTTGTCAGAAATAACATCCTTAGATTCATAGTCGAGGACTCCTGTTTTCCAGTTAGTGTAGATAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCATTTGCTGATGCTAGTTCTCTGGATATCTCCTCCGGCACAACTGCGCTAACTGCTTTCATTTTTGGAAGAACAATGATTATTGGGAATGCCGGGGATTGTCGAGCAGTTCTGGGGAGGAGGGGCAAGGCTATTGAGGTGTCAAAGGATCACAAGCCCAATTGTGCATCTGAAAAACTCAGAATAGAGAAGCTCGGGGGAGTGATTTATGATGGCTACCTGAATGGTCAGTTATCTGTTGCGCGTGCTATAGGAGACTGGCACATGAAAGGTGCCAAGGGTTCTGCATGCCCGCTGAGTGCAGAGCCAGAGCTGCAGGAATTGCAATTGACGGAGGAAGATGAATTTCTAATTATGGGCTGCGATGGTCTTTGGGATGTGATGAGCAGTCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTGCATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGAGAGGCGCTGAAGCGCAATACATGCGATAATTTAACTGTTATTGTAGTCTGTTTTTCTGCTGATCCGCCCCCTCGGATAGAAATTCCCCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGCATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1161 45.39 MATGIDFSPPFALLEGGGYSKDNVSATNDESSDSFNSLKQMTTGKPPRHLSVSRHSVSSIKLLDQADLSLDADTLGNNSPDGKAGFLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVFDGHGGTDAAAFVRNNILRFIVEDSCFPVSVDKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIGNAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELQLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPPTRVRRSISLEGLHLLKGVLDCNS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 140957 145017 + Cp4.1LG02g08360.1 Cpe02g00026 463975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00026 386 MobiDBLite consensus disorder prediction 21 51 - -
Cpe02g00026 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Cpe02g00026 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Cpe02g00026 386 MobiDBLite consensus disorder prediction 18 51 - -
Cpe02g00026 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Cpe02g00026 386 CDD PP2Cc 90 351 IPR001932 -
Cpe02g00026 386 Gene3D - 78 354 IPR036457 -
Cpe02g00026 386 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Cpe02g00026 386 SMART PP2C_4 81 349 IPR001932 -
Cpe02g00026 386 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 373 - -
Cpe02g00026 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00026 Cpe06g00012 CCT
Cpe02g00026 Cpe06g00012 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00026 Cpe-Chr2:140957 Cpe17g00726 Cpe-Chr17:5769558 5.08E-99 dispersed
Cpe04g01388 Cpe-Chr4:11226445 Cpe02g00026 Cpe-Chr2:140957 4.45E-34 dispersed
Cpe02g00026 Cpe-Chr2:140957 Cpe06g00012 Cpe-Chr6:44878 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00026 K14803 - csv:101205355 723.776