Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00037 ATGGCTGGATCGGATGAGAACAACCCGGATGTGACCGGACGAGCAAATCTCCATGAACTGATGCTGTTCTCAACTGTAAAGTTCCTCCCATTCCGATCCATCGACCGATTACTCGGTCAGAAGTTTGCAGCTCAGCTGGCCGACAAGCAGCAGCAACCTCTGCCTGAGGTTGATAGAAAGCCATTACAATCTGCTCCAACTCGAAAAGACTCAATAGATCATCACCCCATCACAGAGGAAGATGATTCTATGGACGAATCGGCAGTACCGATGTTCGTTCAACATACAAAAGCAATGTTGGATGAAATTGACAAAATGGAAGAGGTGGAAATGGAAGATATAGAAGAAGAGCCAGTCATGGACATAGACAGCTGCGATAAGAAGAACCAGCTAGCTGTTGTGGAATACATTGATGACTTGTATGCTTGCTACAGGAGAGCCGAGGTTTCTGGCTGTGTCCCACCAAACTACATGGCTCACCAAGCAGATATTAACGAGAGGATGAGAGGGATTCTCATTGACTGGCTAATTGAGGTGCACTACAAGTTTGAGCTGATGGAGGAGACATTGTACCTCACAGTCAACCTGATCGATAGATTCTTGGCGGTTCAGTCGGTGGTGAGGAAGAAGCTCCAGCTTGTTGGAGTGACGGCGATGCTTATTGCCTGCAAGTACGAGGAGGTTTCTGTTCCTATTGTGGATGATCTTATTCTCATATCTGACAAGGCCTACAGCCGAAAAGAAATTCTGGACATGGAAAAGTTGATGGTAAACACCTTACAGTTCAATCTGTCTGTTCCAACACTTTATGTGTTCATGAGAAGGTTTCTCAAAGCTGCCCAATCTGATAGAGAGCTGGAGCTGCTGTCATTCTTCATGGTGGAGCTCTGTCTTGTGGAATATGAAATGCTCAAGTATAAACCTTCATTAATGGCTGCTGCTGCGGTCTTCACTGCTCAATGCACCATCAATGGCTTCAAGGAATGGAGCAAAACCAGTGAGTGGCACACTGGGTATTCTCAGGAGCAGCTTATGGAATGTTCACGTTTGATGGTGGAGTTTCATGAGAAAGCAGGGACAGGAAAATTGACAGGAGTTCACAGGAAGTATAGCACATCCAAGTTTGGATATGCTGCAAGAAGTGAACCAGCTAGCTTTCTGTTGGAAGAAGAAAGGCCATAG 1182 45.77 MAGSDENNPDVTGRANLHELMLFSTVKFLPFRSIDRLLGQKFAAQLADKQQQPLPEVDRKPLQSAPTRKDSIDHHPITEEDDSMDESAVPMFVQHTKAMLDEIDKMEEVEMEDIEEEPVMDIDSCDKKNQLAVVEYIDDLYACYRRAEVSGCVPPNYMAHQADINERMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLIACKYEEVSVPIVDDLILISDKAYSRKEILDMEKLMVNTLQFNLSVPTLYVFMRRFLKAAQSDRELELLSFFMVELCLVEYEMLKYKPSLMAAAAVFTAQCTINGFKEWSKTSEWHTGYSQEQLMECSRLMVEFHEKAGTGKLTGVHRKYSTSKFGYAARSEPASFLLEEERP 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 201461 205407 + Cp4.1LG02g08400.1 Cpe02g00037 463986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00037 393 MobiDBLite consensus disorder prediction 47 87 - -
Cpe02g00037 393 Pfam Cyclin, N-terminal domain 140 265 IPR006671 -
Cpe02g00037 393 PANTHER CYCLIN-B2-3-RELATED 46 385 - -
Cpe02g00037 393 SMART cyclin_7 174 258 IPR013763 -
Cpe02g00037 393 SMART cyclin_7 271 353 IPR013763 -
Cpe02g00037 393 CDD CYCLIN 265 352 IPR013763 -
Cpe02g00037 393 SUPERFAMILY Cyclin-like 266 384 IPR036915 -
Cpe02g00037 393 Pfam Cyclin, C-terminal domain 267 381 IPR004367 -
Cpe02g00037 393 Gene3D - 139 378 - -
Cpe02g00037 393 MobiDBLite consensus disorder prediction 62 82 - -
Cpe02g00037 393 CDD CYCLIN 168 257 IPR013763 -
Cpe02g00037 393 Gene3D - 153 265 - -
Cpe02g00037 393 SMART Cyclin_C_2 267 384 IPR004367 -
Cpe02g00037 393 ProSitePatterns Cyclins signature. 169 200 IPR006671 -
Cpe02g00037 393 SUPERFAMILY Cyclin-like 128 264 IPR036915 -
Cpe02g00037 393 PANTHER CYCLINS 46 385 IPR039361 -
Cpe02g00037 393 PIRSF Cyclin_A_B_D_E 24 393 IPR039361 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00037 Cpe-Chr2:201461 Cpe10g00711 Cpe-Chr10:4071282 1.60E-140 dispersed
Cpe15g00905 Cpe-Chr15:8690452 Cpe02g00037 Cpe-Chr2:201461 3.19E-60 transposed
Cpe20g00001 Cpe-Chr20:590 Cpe02g00037 Cpe-Chr2:201461 5.01E-108 transposed
Cpe10g00710 Cpe-Chr10:4064422 Cpe02g00037 Cpe-Chr2:201461 4.44E-40 wgd
Cpe19g00895 Cpe-Chr19:6525694 Cpe02g00037 Cpe-Chr2:201461 4.65E-151 wgd
Cpe02g00037 Cpe-Chr2:201461 Cpe06g00024 Cpe-Chr6:125963 3.27E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00037 K21777 - csv:101223199 620.157