Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00053 GAAAATTTCAATAACAGAGCAAAGAGAGGGAAAGAAAACGACCAACACAGAGCGCGAGGGCGCCAAATTCCTTACCAACTTCCAATCTTTGTTTTGATTTCGTTTTGTGTGGTTCTTGTTTCTCTCATGGCTATGGACGATACTGAGAGCTGTTGTAGTAGACCGGTGGATGATTTTTCGACTCAGACCTGGAGACAGAAGCAGAAGGTTGGTGTTTACGTCGAAGTTCTTCGTCGACTCAGACTGTCGCATGAGGCGGAGACCAGCTTTCCTGGTTTTGAGGATGAACTATGGGCTCATTTTCATCGCCTTCCTACTAGGTATGCTATGGACGTCAACGTGGAGAGGGCTCAAGATGTTCTCATGCACAAAGATCTTCTCTTCATGGCACATGCTCCTGCTACTCGTCCTGCAATTGATGTCCGTCTCGTACAGGTTCATTCATCTCCTGGCACAAACTCTGGCAAACAACACCCCCCACCAGCATTTGGTTCAACAACAGAGGTCGAATCTGGTTTTGCGATCAGCCAATTACATGATATAAATCAGCCTGACACTTTATCCTGGCCGATGCATGAAATTACAATATCAACAATTGACAAGCCAAAACTACTCAGTCAGTTGACGTCCTTACTTTCTGAGATTGGGCTGAATATTCAAGAAGCGCATGCTTTTTCAACAACAGATGGCTTTTCCTTGGATGTTTTTGTAGTTGATGGTTGGGCAATTGAGGATACCAAACAGCTAAAGGATATACTAGCTGAAGAAATATCAAAGATTCAGAAAAGGCATCCTCTATTTACACCTTGGAGCATTTCCCCAACTGGGAAGAAAGACAAAATTGGAGTCAAATTCATCACAAATTATGTCAACATTCCACGGCACAAAGTTGGTGCATGGGAAATTGATGCGAGTCTGTTAATCTACGAGAAGAAAATTGTTTCTGGATCTTTTAGTGACTTGTATAAGGGCACTTTCTATGGTCAAGAGGTGGCTATTAAACTTCTAAAAGATGGAAGCTTGAATGAGGCTGTACGGCGGGAATTTGCTCAAGAAATTCATATCATGAGAAATCTTCGGCATAAGAATGTTGTCCAATTTATTGGTGCATCTACCAGACCTCCAAGCGCTTTTATTGTTACTGAATACATGCCTGGTGGAAGCATGCATGATTTCTTACATCAAAAAAAGGGCGTTCTTAGTTTTCCTTCCTTACTAAGAGTGGCAGTTGATGTGTCCAAGGGAATGAACTATTTGCACCAAAAGAATATCATCCATAGAGATCTGAAAGCTGCAAATCTTTTGTTGGACGAAGATGGGGTTATTGAGCACAAACCATATGATCATAAAGCTGATGTTTACAGCTTTGGGATAGTTTTGTGGGAGCTGCTTACAGGGCAGCTGCCTTATGATAACCTGACTCCGTTACAAGCGGCAATGGGCGTGATCCAGAAGGGTCTGAGGCCTAAGATTCCGAGGCATGCAAATCCAATGATCGTGGACTTGCTTGAGAGATGCTGGCGGCAGGATCCATCTTTGAGGCCTGAATTTTCTGAAATTACGAAACTTTTGCAGCAAACCCTCAAGGAGGGCTCAACTGGAAGGCGGCCAAAATTTTGGGCAGGAGCAGAGCGTTTTATGGTGGAGCGAGGAGATCGTGAAGATGTGGAGATTCGCGATCTTGTGCGTGCTGAAGATGTGGGGATCAGAATTCCTGCGACATCGAAGAACTTGAAGCCTGCGATCAAGAAGAAAGATTCTGGAATCCCCAATAATTCTCAGGGTCTGCCTTTCTCCGGCGTCTCCGGTGTCGTCGACCAACGTGTCTCTGTCTGCCACCAGTGT 1845 44.39 ENFNNRAKRGKENDQHRARGRQIPYQLPIFVLISFCVVLVSLMAMDDTESCCSRPVDDFSTQTWRQKQKVGVYVEVLRRLRLSHEAETSFPGFEDELWAHFHRLPTRYAMDVNVERAQDVLMHKDLLFMAHAPATRPAIDVRLVQVHSSPGTNSGKQHPPPAFGSTTEVESGFAISQLHDINQPDTLSWPMHEITISTIDKPKLLSQLTSLLSEIGLNIQEAHAFSTTDGFSLDVFVVDGWAIEDTKQLKDILAEEISKIQKRHPLFTPWSISPTGKKDKIGVKFITNYVNIPRHKVGAWEIDASLLIYEKKIVSGSFSDLYKGTFYGQEVAIKLLKDGSLNEAVRREFAQEIHIMRNLRHKNVVQFIGASTRPPSAFIVTEYMPGGSMHDFLHQKKGVLSFPSLLRVAVDVSKGMNYLHQKNIIHRDLKAANLLLDEDGVIEHKPYDHKADVYSFGIVLWELLTGQLPYDNLTPLQAAMGVIQKGLRPKIPRHANPMIVDLLERCWRQDPSLRPEFSEITKLLQQTLKEGSTGRRPKFWAGAERFMVERGDREDVEIRDLVRAEDVGIRIPATSKNLKPAIKKKDSGIPNNSQGLPFSGVSGVVDQRVSVCHQC 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 277513 286509 - Cp4.1LG02g08160.1 Cpe02g00053 464002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00053 615 Gene3D - 191 264 - -
Cpe02g00053 615 SMART serkin_6 307 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00053 615 SUPERFAMILY Protein kinase-like (PK-like) 287 523 IPR011009 -
Cpe02g00053 615 Coils Coil 243 263 - -
Cpe02g00053 615 Gene3D Transferase(Phosphotransferase) domain 1 443 538 - -
Cpe02g00053 615 Gene3D Phosphorylase Kinase; domain 1 300 382 - -
Cpe02g00053 615 ProSiteProfiles ACT domain profile. 193 270 IPR002912 -
Cpe02g00053 615 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE 441 535 - -
Cpe02g00053 615 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE 54 439 - -
Cpe02g00053 615 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 441 535 - -
Cpe02g00053 615 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 439 - -
Cpe02g00053 615 Gene3D Transferase(Phosphotransferase) domain 1 383 442 - -
Cpe02g00053 615 CDD STKc_MAP3K-like 315 524 - -
Cpe02g00053 615 ProSiteProfiles Protein kinase domain profile. 307 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00053 615 Pfam Protein tyrosine and serine/threonine kinase 309 442 IPR001245 GO:0004672|GO:0006468
Cpe02g00053 615 SUPERFAMILY ACT-like 191 258 IPR045865 -
Cpe02g00053 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02111 Cpe02g00053 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00053 Cpe-Chr2:277513 Cpe13g00675 Cpe-Chr13:6349189 2.09E-85 dispersed
Cpe06g00255 Cpe-Chr6:1364022 Cpe02g00053 Cpe-Chr2:277513 1.49E-21 transposed
Cpe14g01045 Cpe-Chr14:8766023 Cpe02g00053 Cpe-Chr2:277513 4.27E-167 wgd
Cpe15g00613 Cpe-Chr15:6819267 Cpe02g00053 Cpe-Chr2:277513 0 wgd
Cpe02g00053 Cpe-Chr2:277513 Cpe04g00611 Cpe-Chr4:6366608 0 wgd
Cpe02g00053 Cpe-Chr2:277513 Cpe08g01301 Cpe-Chr8:9370950 2.76E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62197 PF07714 PK_Tyr_Ser-Thr 1.20E-35 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00053 - - cpep:111789352 1067.76