Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00059 ATGGCGCAAACGACGCCGAATCACACACAGACGGTCTCCGGTTGGGCAGCTCACGATTCTTCCGGCAAGATCACACCGTACACTTTCAAACGCAGAGAGAATGGTCCAGACGACGTGACGATAGAGATTTTGTACTGTGGGATATGCCATACCGATCTTCACTATGCCAAAAACGAGTGGGGCATCACCATGTATCCTGTAGTTCCCGGGCACGAGATGACAGGTGTGATTTCGAAGGTGGGAAGCAACGTGAAGAAGTTCAAAATAGGAGACAGAGTGGGAGTGGGATGTATAGCCGCTTCGTGTTTGAGCTGTGAGTTCTGCCAAGATTCACAAGAGAATTACTGTGAAAAATTGCAGTTTACATACAATGGAATCTTCTGGGATGGGAGCATAACTTATGGCGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTGGTGCACATCCCGGAGAGCCTGCCGATGGACGCTGCGGCGCCGTTGCTGTGCGCTGGGATTACAGTGTTCACGCCCATGAAAGACATGGATCTGATCCACTCACCGAGGAAGAAGGTGGGAGTGGTGGGTCTTGGTGGGCTTGGCCACATAGCTGTCAAATTTGGGAAGGCGTTTGGCCACCATGTGACTGTCATCAGCACCTCCGCTTCCAAGGAGAAAGAAGCTAAAGAACGCCTTGGCGCCGACGAGTTCATAGTCAGTAAAGATCCTCAACAAATGCAGAGGCACAGGAGGACGTTGGATTTTGTATTGGACACAGTGTCGGCACAGCATTGTATTGGACCAATCTTGGAACTGCTAAAAGTGAATGGGACATTGTCCATTGTGGGGGCCCCAGACAAGCCCATTCAACTGCCCTCCTTCCCTTTAATCTTTGGAAAAAGGACTGTGAAAGGAAGCATTATAGGTGGAATACAAGAAACTCAGGAAATGATGGATTTGTGTGGGAAGTACAACATCACTAGTGATATTGAGGTGGTAAAGCCGGACGACATCAACCGTGCTATGGAACGTCTCACTAAGAACGATGTTCGATATCGATTCGTCATTGATATTGCCCAACATAATACTAAGTTGTAA 1083 48.29 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGPDDVTIEILYCGICHTDLHYAKNEWGITMYPVVPGHEMTGVISKVGSNVKKFKIGDRVGVGCIAASCLSCEFCQDSQENYCEKLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDMDLIHSPRKKVGVVGLGGLGHIAVKFGKAFGHHVTVISTSASKEKEAKERLGADEFIVSKDPQQMQRHRRTLDFVLDTVSAQHCIGPILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKYNITSDIEVVKPDDINRAMERLTKNDVRYRFVIDIAQHNTKL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 305614 307911 - Cp4.1LG02g08130.1 Cpe02g00059 464008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00059 360 Gene3D - 15 353 - -
Cpe02g00059 360 Pfam Alcohol dehydrogenase GroES-like domain 36 150 IPR013154 -
Cpe02g00059 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Cpe02g00059 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Cpe02g00059 360 CDD CAD1 14 352 - -
Cpe02g00059 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Cpe02g00059 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Cpe02g00059 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Cpe02g00059 360 Gene3D - 166 323 - -
Cpe02g00059 360 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Cpe02g00059 360 SUPERFAMILY GroES-like 17 177 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00059 Cpe-Chr2:305614 Cpe10g00530 Cpe-Chr10:3105169 4.57E-139 dispersed
Cpe02g00059 Cpe-Chr2:305614 Cpe16g00065 Cpe-Chr16:1275558 1.28E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00059 K00083 - csv:101213170 664.07