Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00064 ATGAGGAAGAAATCGCTCAATCCTCTTGTTTGCAACTTCTTTATGTTCTGTTTACTTCTTTTCTCTGCCCGTTTCTGCTTCGCCAATCGGGATATGGAAGCGCTGTTGAAAATGAAGAATGCCTTGATTGCACCAGGGAGATCGGGGCTTACTGATTGGCAACCGGCGTCTTCGCCGTCTGCTCATTGCGCCTTCTCTGGAGTTTTGTGCGATGTTGATTCTAGAGTTGTTGCGCTTAACATCTCGAATTTCCGTCTGTTTGGCAGGATTTCGCCGGCGATTGGGATGTTGGAAAAGCTTGTAAACTTGACGTTAGTGAATGACAATCTCACTGGAGTGATTCCTTTCGAAATGGCGAAACTCACGTCGCTTAAGACTCTGAACCTCTCTAATAACTTATTCCGGGATAGATTGCCGGCGGAAATCACGCTCGGAATGATGGAACTCGAGGTTTTCGATGTCTATAACAACAATTTCTCTGGTATGCTTCCGGTGGAGTTCGTCAAGCTGAAGAAGCTTAAGTATCTAGATCTCGGCGGTAACTTCTTTACCGGTCAGATTCCGGAGGCTTACTCTGAGATGGAGATGCTTGAGTTTTTGAGCTTGAGGGGAAATGCGCTTTCCGGGAGACTTCCGGCGAGTTTGGCGCGTTTGAAGAATCTTACGCATCTTTACGCTGGATATTATAACCATTACGACGGCGGGATTCCGGCTGTGTTTGGAACGTTGAGTGCTCTCGAGCTTCTTGATTTAGGGAACTGTAATCTCTCCGGTGAAATTCCACCGAGTTTGGGGAATTTGAAGGTCTTGCACTCTCTATTTCTACAAGTAAACAATCTAACGGGTCGGATTCCTCCCGAACTTTCCGGTTTAGTTAGTCTCAAATCTCTGGACCTCTCGCTGAACGAACTCACCGGCGAGATACCGGCGGGTTTCGTGGCACTGCAGAAAATTACACTCCTCAATTTATTCGGCAACAAACTCCACGGTCCAATTCCTGGTTTCGTCGGTGATTTTCCGCATCTCGAAGTGCTTCAGTTGTGGAATAACAACTTCACGCTCGAGCTTCCAGCGAATCTCGGGCGTAATGGTAAACTATTTCTGCTTGACGTGGCTACAAATCATCTAACTGGACTCATACCTCCTGATTTATGTAATGGTAGATTGAAGACTTTGATTCTGTTGGATAATTACTTCTTTGGACCCATCCCTGAGGAATTAGGACGGTGTGATTCGCTCAAGAAAATAAGAATTGCTGGAAACTTCTTCAATGGAACGGTTCCGGCAGGGTTCTTCAACTTTCCGGCATTGGAACTACTCGATATTAGTAACAATTACTTCTCTGGCACTCTTCCGTCGCGAATGTCAGGCGAGTTTCTTGGAAGTCTGCAGCTCAGTAACAACCACATCACAGGGGAAATTCCGGCGGCGATTAAGAATTTAAAAAACTTGCAGGTTCTTTCCCTGGAACATAACCAATTCACCGGAAATTTACCCGTGGAAATATTTGAATTGAATAAGTTGCTTAGAATCAACACCAGCTTCAACAACATTAGCGGCAAAATTCCGCATTCGCTCGTTCAGTGCACGTCCTTAACATCAATTGATCTCAGTGAAAACTACCTTGTTGGCCAAATTCCCAAAGGAATTTCGGATCTGAAAATCTTGAGCGTTCTCAATTTGTCAAATAATCATCTGACGGGCCAAATTCCGAATGAAATTCGGTCGATGATGAGTCTTACAACTCTTGATTTGTCCTACAACAATTTCATAGGTAAAATCCCCACCGGCGGTCAGTTTTCAGTATTCAACGGCAGCGCATTCGCCGGAAATCCAAACCTCTGTTCCCCTAACGATGGCCCTTGCGCATCGCTCCACAGTAATACGAAATCCATTAAGCTAATCCTCCCTATCGTTGCGGTATTCATCGTTTTGTTATGCGTACTCGCTGGAGTTTACATCAGGAAGAGAAAGAGGATTCAGAAATCAAAGGCATGGAAACTCACGGCGTTCCAACGCCTCGATTTCAAAGCGGAAGACGTCCTAGAATGCTTGAAGGAGGAAAATATCATTGGCAAAGAATACGCGTACACGCTGAAAGTGGACGAGAAGAGCGACGTGTACAGTTTCGGCGTGGTGCTGTTAGAGCTGATAGCCGGGAGGAAGCCAGTGGGAGATTTTGGCGAAGGCGTGGACATAGTAAGGTGGGTCCAGAAAACCATATCAGAACTGTCTCAGCCGTCGGATGCAGCGTCAGTGTTAGCCGTGGTGGACTCGCGGCTGACCGAATACCCTCTCCAAGGCGTGATCCACCTCTTCAAAATAGCGATGATGTGCGTTGAAGAAGACAGCTCCGCAAGGCCTACCATGAGGGAAGTGGTCAAAATGCTCTCGAATCCGCCAAGGTCTGCCCCTGCTCTCATCAACCTCTAA 2433 46.49 MRKKSLNPLVCNFFMFCLLLFSARFCFANRDMEALLKMKNALIAPGRSGLTDWQPASSPSAHCAFSGVLCDVDSRVVALNISNFRLFGRISPAIGMLEKLVNLTLVNDNLTGVIPFEMAKLTSLKTLNLSNNLFRDRLPAEITLGMMELEVFDVYNNNFSGMLPVEFVKLKKLKYLDLGGNFFTGQIPEAYSEMEMLEFLSLRGNALSGRLPASLARLKNLTHLYAGYYNHYDGGIPAVFGTLSALELLDLGNCNLSGEIPPSLGNLKVLHSLFLQVNNLTGRIPPELSGLVSLKSLDLSLNELTGEIPAGFVALQKITLLNLFGNKLHGPIPGFVGDFPHLEVLQLWNNNFTLELPANLGRNGKLFLLDVATNHLTGLIPPDLCNGRLKTLILLDNYFFGPIPEELGRCDSLKKIRIAGNFFNGTVPAGFFNFPALELLDISNNYFSGTLPSRMSGEFLGSLQLSNNHITGEIPAAIKNLKNLQVLSLEHNQFTGNLPVEIFELNKLLRINTSFNNISGKIPHSLVQCTSLTSIDLSENYLVGQIPKGISDLKILSVLNLSNNHLTGQIPNEIRSMMSLTTLDLSYNNFIGKIPTGGQFSVFNGSAFAGNPNLCSPNDGPCASLHSNTKSIKLILPIVAVFIVLLCVLAGVYIRKRKRIQKSKAWKLTAFQRLDFKAEDVLECLKEENIIGKEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWVQKTISELSQPSDAASVLAVVDSRLTEYPLQGVIHLFKIAMMCVEEDSSARPTMREVVKMLSNPPRSAPALINL 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 333563 337055 + Cp4.1LG02g08230.1 Cpe02g00064 464013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00064 810 Gene3D Transferase(Phosphotransferase) domain 1 668 804 - -
Cpe02g00064 810 Pfam Leucine Rich Repeat 172 189 IPR001611 GO:0005515
Cpe02g00064 810 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Cpe02g00064 810 SMART LRR_typ_2 121 145 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 553 577 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 291 315 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 481 505 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 194 218 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 243 267 IPR003591 -
Cpe02g00064 810 SMART LRR_typ_2 339 363 IPR003591 -
Cpe02g00064 810 Gene3D Ribonuclease Inhibitor 230 387 IPR032675 -
Cpe02g00064 810 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Cpe02g00064 810 Pfam Leucine rich repeat 270 328 IPR001611 GO:0005515
Cpe02g00064 810 SUPERFAMILY L domain-like 70 400 - -
Cpe02g00064 810 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Cpe02g00064 810 Pfam Protein tyrosine and serine/threonine kinase 696 797 IPR001245 GO:0004672|GO:0006468
Cpe02g00064 810 Gene3D Ribonuclease Inhibitor 145 229 IPR032675 -
Cpe02g00064 810 Gene3D Ribonuclease Inhibitor 30 144 IPR032675 -
Cpe02g00064 810 SUPERFAMILY RNI-like 347 602 - -
Cpe02g00064 810 PANTHER UNNAMED PRODUCT 11 693 - -
Cpe02g00064 810 PANTHER UNNAMED PRODUCT 694 804 - -
Cpe02g00064 810 Gene3D Ribonuclease Inhibitor 388 622 IPR032675 -
Cpe02g00064 810 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 11 693 - -
Cpe02g00064 810 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 694 804 - -
Cpe02g00064 810 SUPERFAMILY Protein kinase-like (PK-like) 694 798 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00064 Cpe06g00058 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00064 Cpe-Chr2:333563 Cpe10g00515 Cpe-Chr10:3024430 0 dispersed
Cpe02g00064 Cpe-Chr2:333563 Cpe06g00058 Cpe-Chr6:303308 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62199 PF07714 PK_Tyr_Ser-Thr 3.80E-07 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00064 K00924 - csv:101221360 1119.38