Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00066 ATGGCTACCCAAATTTCATTCATATTATGTCTCCTGACTGTCCAAATTTCAATCTCAGCTGTATTGTCCACCACTTTCAGCATCGTAAATAAATGTGATTACACAGTTTGGCCGGGAATTCTCTCAAACGCCGGAGTTTCACCCCTTCCGACAACCGGCTTCGTCCTTGCCGCCGGCGAGTCTCAAACTATCTCCGCTCCCGCGTCTTGGGGCGGTCGGTTCTGGGGAAGAACTCACTGCTCCCAAGACTCCACCGGAAAATTCTCTTGCCTCACTGGAGACTGTGGCTCTGACAAGGTTGAGTGCAGTGGAAACGGTGCAAAGCCGCCGGCAACTCTGGCGGAGTTCACCCTTGACGGCGCCGGCGGGCTGGATTTCTTCGACGTGAGTTTGGTTGACGGTTACAACATCCCTATGCTCGTGGTCCCACAGGGCGGTACCGGGGAGAAGTGCGCGAGCACGGGATGTGTGGTGGATTTGAACGGCGCGTGTCCTTCAGAGCTCAAGCTTACGAGCGTGGACGACGGAAAGAGCATCGCTTGTAAAAGCGCGTGTGAAGCTTTTAACCAACCACAATTCTGTTGTAGTGGCGCGTACGCCACTCCCGATACTTGCAATCCCTCTCCGTATTCGCAAGCGTTTAAAAACGCGTGCCCACGCGCTTACAGCTACGCTTACGACGATTTAACCAGCACGTTTACATGTCTCAACGCCGACTATATCATCACATTTTGCCCCTCGCCCAACACTAGTCAGAAATCAACGGAAACTCACAACGCAAACACGCCAGTGATCAATGGCGGCAATGGCGGCAATGGCACAATGGTTTACGAAGGGGCTGCGTTTGATCTAAGCAGCGCGTCGAGAACAACGCTCCGCCACATTCTAGGCGTAGTTGTTGCCACGGTGGCAGTCCTGCAAATGTGGCAACTCTTTTGA 939 53.25 MATQISFILCLLTVQISISAVLSTTFSIVNKCDYTVWPGILSNAGVSPLPTTGFVLAAGESQTISAPASWGGRFWGRTHCSQDSTGKFSCLTGDCGSDKVECSGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNIPMLVVPQGGTGEKCASTGCVVDLNGACPSELKLTSVDDGKSIACKSACEAFNQPQFCCSGAYATPDTCNPSPYSQAFKNACPRAYSYAYDDLTSTFTCLNADYIITFCPSPNTSQKSTETHNANTPVINGGNGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 340568 346714 - Cp4.1LG02g07870.1 Cpe02g00066 464015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00066 312 PANTHER BNAA02G17480D PROTEIN 15 271 - -
Cpe02g00066 312 PANTHER OS03G0233200 PROTEIN 15 271 IPR001938 -
Cpe02g00066 312 SMART tha2 26 246 IPR001938 -
Cpe02g00066 312 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Cpe02g00066 312 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Cpe02g00066 312 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Cpe02g00066 312 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Cpe02g00066 312 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Cpe02g00066 312 PIRSF PR5 1 276 IPR001938 -
Cpe02g00066 312 Pfam Thaumatin family 30 246 IPR001938 -
Cpe02g00066 312 CDD TLP-PA 25 245 - -
Cpe02g00066 312 Gene3D Thaumatin 24 246 IPR037176 -
Cpe02g00066 312 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00066 Cpe07g00360 CCT
Cpe02g00066 Cpe07g00360 ECH
Cpe02g00066 Cpe11g00260 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00066 Cpe-Chr2:340568 Cpe08g00923 Cpe-Chr8:7261778 5.59E-97 dispersed
Cpe10g00668 Cpe-Chr10:3853700 Cpe02g00066 Cpe-Chr2:340568 6.73E-99 wgd
Cpe11g00260 Cpe-Chr11:1408672 Cpe02g00066 Cpe-Chr2:340568 1.21E-137 wgd
Cpe14g01026 Cpe-Chr14:8632746 Cpe02g00066 Cpe-Chr2:340568 1.28E-106 wgd
Cpe16g00306 Cpe-Chr16:4963336 Cpe02g00066 Cpe-Chr2:340568 7.47E-116 wgd
Cpe19g00864 Cpe-Chr19:6375834 Cpe02g00066 Cpe-Chr2:340568 5.20E-93 wgd
Cpe02g00066 Cpe-Chr2:340568 Cpe06g00061 Cpe-Chr6:313847 0 wgd
Cpe02g00066 Cpe-Chr2:340568 Cpe07g00360 Cpe-Chr7:2326165 9.65E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00066 - - csv:101214136 546.584