Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00081 ATGACGGCTGGACTCGGGAAATGCAGCAAAATCCGACACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCACGAATATCCGCCAATCGTATCCCCTCGGACGTACCGGCCGGACACGTGGCCGTTTGCGTTGGAACGAGCTGTCGACGGTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTTTAGTCGAAGCAGAAGAGGAATACGGGTTTAGCAATTCAGGCCCCTTGGCAATCCCTTGCGACGAATCGGTTTTCGAAGAAGTGATCCGGTTCATCTCTAGATCCGAGCCACCCAACTCGGGGCGGTTCGTGAAATTGGACGATTGTCAGAGTTACTACCATATCGGAATCAGAAACAGAGTCGATTTCTGGCCGGAATCTCGGCCTTTGCTTCATGGATTGGCCGAGAAATCCATCTGGTAA 453 52.98 MTAGLGKCSKIRHIVRLRQMLRRWRNKARISANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVEAEEEYGFSNSGPLAIPCDESVFEEVIRFISRSEPPNSGRFVKLDDCQSYYHIGIRNRVDFWPESRPLLHGLAEKSIW 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 414547 414999 - Cp4.1LG02g07940.1 Cpe02g00081 464030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00081 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 143 IPR003676 GO:0009733
Cpe02g00081 150 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Cpe02g00081 150 PANTHER SMALL AUXIN-UP RNA-RELATED 6 143 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00081 Cpe-Chr2:414547 Cpe16g00283 Cpe-Chr16:4814742 9.87E-55 dispersed
Cpe02g00079 Cpe-Chr2:398934 Cpe02g00081 Cpe-Chr2:414547 1.16E-19 proximal
Cpe02g00081 Cpe-Chr2:414547 Cpe05g01300 Cpe-Chr5:9073617 3.12E-57 wgd
Cpe02g00081 Cpe-Chr2:414547 Cpe06g00077 Cpe-Chr6:385010 1.08E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00081 K14488 - csv:101216342 283.108