Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00139 ATGGTTGATTTGGAAAATTCTTCCCCGGTTGAGGTTTCCAGAGATGCTGGTTTATCTTCTTCAGGTTATATTGAACCAGTGGCGGTGGTGGCTCCGACGAAGAAGAAACGGAACCTGCCTGGAATGCCAGATCCGGCGGCGGAGGTGATTGCTTTGTCGCCGGAGAGTTTACTGGCGACTAACCGGTTCGTATGCGAGATCTGCAACAAAGGTTTCCAGCGGGACCAAAACCTGCAGCTTCACCGGCGAGGCCACAACCTTCCGTGGAAGCTCCGACAGCGGACTAGCAATGAGGTTCGTAAGCGCGTCTATGTTTGCCCGGAACCTTCCTGCGTCCACCATAACCCGGCGAGAGCGCTTGGCGATCTCACTGGAATAAAGAAGCATTTCTGTAGAAAGCACGGCGAGAAGAAATGGAAGTGCGAGAGATGCTCGAAGAAATACGCCGTACAATCCGATTGGAAAGCGCACATGAAAACTTGCGGAACTCGAGAGTACAAATGCGATTGCGGCACTTTNAGGAGAAGCTTGGATTACTCTCAAGAATCCCCCATTTTGAGGGATAGCTTTATTACACATCGAGCCTTTTGCGATGTATTGGCGGAGGAAAGTGCTCGTGCTCAAACCCTAGCAGTTCAAAACTATGAAGGAAAGGAATCCACCACTTCAAAAGCGGCCGTGACTTCGCCTCCTCCGCCGCCGCTAACACCGTCGACCACGGTGGTTTCTCCGGCTTTATCGATTCACAGCTCAGAGCTAGCTGATAATCCGATAAGACTTCCATCTGTTTCAACGCCTGCAGCGACGACATGCTTGACCTCCGCGTCTGTCAATAGTACCACAAATGCAAGCGCTAACGGCAGTAGCTCAAACAATGTGTTTGGAAATTGTACTGTTTTTGCCCCTTCTGCGTCAATTTCAGGGACGACCCAGATATCCCCAACATTACCACCACCCAGTTTACCCGCGTCAATAGTACCCTACGATTGCGCCTCTATTCGCCCTTCTGCTTCCGCAGTTAATCCCACGTCGCTCTCTCTCTCCACATCTCTCTATCTTTCCTCTAAAGGATCCTCCCACTTTGCCCCATCTGACCAAGATCGTCTGCAGTACACGTGGTCCACTCAACCGGCAGCCATGTCTGCCACCGCCCTGCTGCAGAAGGCAGCAGAAATGGGGGCAACAGCGTCTAATCCGTCGTTGTTCCGTGGCTTTGGGATGGCCACTTCTTCGACTGGTCAAGATACCTCTGCCACTATTCAATGGAGTAGGAATTTGAACCGAGATCACCGGAATGGCTCTTCGTTAACGGCTGGTGTAGGGCTTGATCTCCCATCCGGACCTGACGGTTCTGGTTTGATGATGGCTGGAGGCCCATTTTGCTCGTTTGGAAGTCAGCCCATGACGAGAGATCTTCTTGGTCTTGGCTTAGGCGGTGGTGGGGCCTCTGCAAGTAGATTCTCGGCTTTGATTGCTTCCATGGGTGGTGGGTCTGGTTACCCCGTTGCAGCTTCAGACGCCTGCGGCGGAAGTGGCAATGGAAGCCCCTCCGGCGACGCTTGGGATCAAGATGAAAAGCATTGA 1584 52.4 MVDLENSSPVEVSRDAGLSSSGYIEPVAVVAPTKKKRNLPGMPDPAAEVIALSPESLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTSNEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTXRRSLDYSQESPILRDSFITHRAFCDVLAEESARAQTLAVQNYEGKESTTSKAAVTSPPPPPLTPSTTVVSPALSIHSSELADNPIRLPSVSTPAATTCLTSASVNSTTNASANGSSSNNVFGNCTVFAPSASISGTTQISPTLPPPSLPASIVPYDCASIRPSASAVNPTSLSLSTSLYLSSKGSSHFAPSDQDRLQYTWSTQPAAMSATALLQKAAEMGATASNPSLFRGFGMATSSTGQDTSATIQWSRNLNRDHRNGSSLTAGVGLDLPSGPDGSGLMMAGGPFCSFGSQPMTRDLLGLGLGGGGASASRFSALIASMGGGSGYPVAASDACGGSGNGSPSGDAWDQDEKH 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 691915 695518 + Cp4.1LG02g07320.1 Cpe02g00139 464088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00139 527 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Cpe02g00139 527 Pfam Zinc-finger of C2H2 type 63 85 - -
Cpe02g00139 527 Gene3D Classic Zinc Finger 60 161 - -
Cpe02g00139 527 SUPERFAMILY beta-beta-alpha zinc fingers 62 160 IPR036236 -
Cpe02g00139 527 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 27 516 - -
Cpe02g00139 527 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 27 516 - -
Cpe02g00139 527 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 85 IPR013087 -
Cpe02g00139 527 MobiDBLite consensus disorder prediction 502 527 - -
Cpe02g00139 527 SMART c2h2final6 139 159 IPR013087 -
Cpe02g00139 527 SMART c2h2final6 63 85 IPR013087 -
Cpe02g00139 527 SMART c2h2final6 104 134 IPR013087 -
Cpe02g00139 527 MobiDBLite consensus disorder prediction 221 241 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00139 Cpe07g00434 CCT
Cpe02g00139 Cpe07g00434 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00139 Cpe-Chr2:691915 Cpe10g00600 Cpe-Chr10:3504977 1.78E-131 dispersed
Cpe12g00956 Cpe-Chr12:8097758 Cpe02g00139 Cpe-Chr2:691915 4.50E-54 transposed
Cpe10g00598 Cpe-Chr10:3500010 Cpe02g00139 Cpe-Chr2:691915 1.11E-127 wgd
Cpe19g00801 Cpe-Chr19:6035762 Cpe02g00139 Cpe-Chr2:691915 4.21E-107 wgd
Cpe02g00139 Cpe-Chr2:691915 Cpe07g00434 Cpe-Chr7:2791390 2.91E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48976 PF12874 zf-met 0.0038 CL0361 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00139 K25869 - zju:107420256 526.939