Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00145 ATGCGCTCCGCCCTCCTCCTCCTTCTCCTCCTCGCCGTCTGCGCCGCCTCCCATGCCGCAATATTCAGAGAAGCCCCCCAATTTTTCAATTCCCCGGACTGCCCTTCCCTGCCCGATGATCTGGAGAAACGCAATGAGAAGGGACAACACCACTGCTTCAATCATGCCGTCCACGTGGCGATGACGTTGGACACCGCTTACATACGTGGCTCCATGGCCGCCGTCCTTTCCGTCCTTCAACACTCCTCCTGTCCTCAAAGCGTAATTTTCCACTTCGTCTATTCCGCATCCGCCAACGCGTCATCTCTTCACGCCACCGTCTCCCATTCATTCCCTTACCTCAAATTCCAACTCTACCCTTTCGACGACGAAGCGGCCTCGCGATTGATTTCCACGTCAATCCGATCCGCGTTGGACTGTCCGTTGAACTACGCGCGTAGCTACTTAGCCAACCTCCTTCCCACTTGCGTCGCTCGAGTCGTGTACCTTGACTCGGACCTGATCCTCGTCGACGACATTGCTAAACTCGCCGCCCATCCACTCGGCGGCGAGTCAGTCCTCGCCGCGCCGGAGTACTGCAACGCCAATTTTACCGCCTATTTTACGCCGTCGTTTTGGTCCAACCCGTCTTTGTCCTTAACGTTTGCGAACCGGAAGGCGTGTTACTTCAACACGGGTGTTATGGTGATCGATCTGGACCGGTGGAGGGCCGGGGACTACACGACCAAGATTGAGGAATGGATGGAATTGCATAAGAGAATAAGAATCTACGAATTGGGGTCGTTGCCTCCGTTTTTGTTGGTGTTCGGCGGGAGGATTTCTCCGGTGGATCACCGGTGGAACCAGCACGGGCTCGGTGGCGACAATATCAGAGGACTCTGCAGGGATTTGCACCCGGGTCCGGTCAGTTTGTTGCATTGGAGTGGCAAAGGAAAACCGTGGGCTCGATTGGACGCGAACCGGCCCTGCCCTTTGGACGCCCTTTGGGCTCCCTACGATTTGTTACAGACCCCATTTTCAATCGATTCTTGA 1032 55.72 MRSALLLLLLLAVCAASHAAIFREAPQFFNSPDCPSLPDDLEKRNEKGQHHCFNHAVHVAMTLDTAYIRGSMAAVLSVLQHSSCPQSVIFHFVYSASANASSLHATVSHSFPYLKFQLYPFDDEAASRLISTSIRSALDCPLNYARSYLANLLPTCVARVVYLDSDLILVDDIAKLAAHPLGGESVLAAPEYCNANFTAYFTPSFWSNPSLSLTFANRKACYFNTGVMVIDLDRWRAGDYTTKIEEWMELHKRIRIYELGSLPPFLLVFGGRISPVDHRWNQHGLGGDNIRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFSIDS 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 724870 725901 + Cp4.1LG02g07280.1 Cpe02g00145 464094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00145 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 58 323 IPR029044 -
Cpe02g00145 343 Pfam Glycosyl transferase family 8 58 316 IPR002495 GO:0016757
Cpe02g00145 343 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 12 343 - -
Cpe02g00145 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 57 334 IPR029044 -
Cpe02g00145 343 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 343 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00145 Cpe07g00444 CCT
Cpe02g00145 Cpe06g00125 CCT
Cpe02g00145 Cpe06g00125 ECH
Cpe02g00145 Cpe07g00444 ECH
Cpe02g00145 Cpe11g00181 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00145 Cpe-Chr2:724870 Cpe17g00767 Cpe-Chr17:6026426 6.41E-133 dispersed
Cpe10g00391 Cpe-Chr10:2295222 Cpe02g00145 Cpe-Chr2:724870 0 wgd
Cpe11g00181 Cpe-Chr11:982405 Cpe02g00145 Cpe-Chr2:724870 0 wgd
Cpe19g00575 Cpe-Chr19:4823427 Cpe02g00145 Cpe-Chr2:724870 0 wgd
Cpe02g00145 Cpe-Chr2:724870 Cpe06g00125 Cpe-Chr6:627456 0 wgd
Cpe02g00145 Cpe-Chr2:724870 Cpe07g00444 Cpe-Chr7:2853315 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00145 K20893 - csv:101211531 627.861