Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00154 ATGAAAGGCTCGGGCTGCTGTTTGTTCATTTCTCTTCTTCTCCTCCAATCTTTTTCGTTTTTCGCTTCGGCTCTTTCCGATGCCGAAGCGTCGTCCATTGCCCGCCGCCAGCTTATAACCTTTCTCGAGACCGATGATTTGCCCGACGATTACGAGTCCACGGTTGTGGTGACTGAGACCTTTCCCAATTCCAGGCTCCGACGGGCTTTCATTGCCCTTCAAGCCTGGAAGAGGTCCATTTACTCCGACCCTTTAAACACCACCGCCAATTGGGTCGGCGCTGATGTCTGTTCCTACACCGGAGTTTTCTGTACCTCTGCTCTGGACGACCCCAATGTCCAAGTCGTGGCCGGAATTGACCTCAACCATGCCGACATCGCCGGTTACCTCCCCGTTGAGCTCGGTCTACTGTCGGACATCGCATTGTTTCACATCAACTCCAACCGATTCTGCGGCCTTATCCCGCCGAGCTTCGAGAGGATGATTCTCCTTCACGAGCTCGACGTTAGCAACAACAGATTTGTGGGCCCTTTTCCTGAAGTCGTTTTGAGGATTCCGAATTTGAAATTTCTGGACATTAGATTCAACGATTTCGAAGGGAAATTGCCTCATGCCCTTTTCACCAAGGAGCTCGACGCCATTTTCCTCAATAACAACAGGTTCACCTCCCACATTCCTGAGAGTTTCGGCGACTCGCCGGCGTCGGTGATCGTGATTGCCAACAACAACTTCACGGGGTGCATTCCGACAAGTATTGGGAAAATGGGGAACACGTTGAACGAGGTTTTAATGTTGAACAATGCGCTTGGTGGTTGCATCCCTGGTGAGCTTGCTCTGCTTGGAAATGCGACGGTTTTCGATGTTTCTTCGAATCAATTGAGTGGGAGCTTGCCGATGAGCTTAGATAGGTTGAAGAATGTGAAGATTATTGATGTCTCTTCCAATAGTTTGACCGGTGTGGTGCATGGAGGTGTGTGTAATTTGCCTAAATTGGCTGAGTTCACATTCGCTGATAATTTGTTTGATGCCGAAGACAATAGGTGTGTGCCTCAGAATAGACAGGATGTTTGGTTGGACGATGCTGACAATTGTTTGCAAGACAGGCCTAAGCAAAAACCGGCCGAGATTTGTAGTTCAGAGATCAGAAAGGCCGTGGATTGCAGTCGGGTTAAGTGCGGCGGAGGATCCAAACCTCCTAAACAGCCAGAGGCACCAATTGATGATCCTCATCGTCAATCACATGTCCCAATGAACCACCCTCCTCCTTCACCTGTAATCAACTCGCTCCCACCACCCCCGGTTGCCTCACCCCCACCACCGGTTGCCTCTCCACCACCACCGGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCACCTTCTCCATCTCCTCCTCCAGTCTCCTCTCCACTGGCACCACTAGAGGACATCATTCTTCCACCAAATTTGGGCTTCGAGTACTCATCACCGCCTCCACCATTGTTCCCAGGCTACTAA 1545 51.52 MKGSGCCLFISLLLLQSFSFFASALSDAEASSIARRQLITFLETDDLPDDYESTVVVTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVVAGIDLNHADIAGYLPVELGLLSDIALFHINSNRFCGLIPPSFERMILLHELDVSNNRFVGPFPEVVLRIPNLKFLDIRFNDFEGKLPHALFTKELDAIFLNNNRFTSHIPESFGDSPASVIVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELALLGNATVFDVSSNQLSGSLPMSLDRLKNVKIIDVSSNSLTGVVHGGVCNLPKLAEFTFADNLFDAEDNRCVPQNRQDVWLDDADNCLQDRPKQKPAEICSSEIRKAVDCSRVKCGGGSKPPKQPEAPIDDPHRQSHVPMNHPPPSPVINSLPPPPVASPPPPVASPPPPVASPPPPVASPPPPVASPPPPVASPPPPPSPSPPPVSSPLAPLEDIILPPNLGFEYSSPPPPLFPGY 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 794354 795898 + Cp4.1LG02g07240.1 Cpe02g00154 464103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00154 514 PRINTS Proline rich extensin signature 400 421 - -
Cpe02g00154 514 PRINTS Proline rich extensin signature 424 440 - -
Cpe02g00154 514 PRINTS Proline rich extensin signature 441 458 - -
Cpe02g00154 514 PRINTS Proline rich extensin signature 461 486 - -
Cpe02g00154 514 MobiDBLite consensus disorder prediction 415 487 - -
Cpe02g00154 514 Pfam Leucine rich repeat N-terminal domain 72 104 IPR013210 -
Cpe02g00154 514 Gene3D Ribonuclease Inhibitor 70 366 IPR032675 -
Cpe02g00154 514 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 3 509 - -
Cpe02g00154 514 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 3 509 - -
Cpe02g00154 514 MobiDBLite consensus disorder prediction 389 491 - -
Cpe02g00154 514 SUPERFAMILY L domain-like 71 343 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00154 Cpe-Chr2:794354 Cpe12g00384 Cpe-Chr12:2744480 4.55E-06 dispersed
Cpe02g00154 Cpe-Chr2:794354 Cpe17g00367 Cpe-Chr17:2640891 1.31E-126 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00154 - - cmax:111480794 790.801