Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00154 | ATGAAAGGCTCGGGCTGCTGTTTGTTCATTTCTCTTCTTCTCCTCCAATCTTTTTCGTTTTTCGCTTCGGCTCTTTCCGATGCCGAAGCGTCGTCCATTGCCCGCCGCCAGCTTATAACCTTTCTCGAGACCGATGATTTGCCCGACGATTACGAGTCCACGGTTGTGGTGACTGAGACCTTTCCCAATTCCAGGCTCCGACGGGCTTTCATTGCCCTTCAAGCCTGGAAGAGGTCCATTTACTCCGACCCTTTAAACACCACCGCCAATTGGGTCGGCGCTGATGTCTGTTCCTACACCGGAGTTTTCTGTACCTCTGCTCTGGACGACCCCAATGTCCAAGTCGTGGCCGGAATTGACCTCAACCATGCCGACATCGCCGGTTACCTCCCCGTTGAGCTCGGTCTACTGTCGGACATCGCATTGTTTCACATCAACTCCAACCGATTCTGCGGCCTTATCCCGCCGAGCTTCGAGAGGATGATTCTCCTTCACGAGCTCGACGTTAGCAACAACAGATTTGTGGGCCCTTTTCCTGAAGTCGTTTTGAGGATTCCGAATTTGAAATTTCTGGACATTAGATTCAACGATTTCGAAGGGAAATTGCCTCATGCCCTTTTCACCAAGGAGCTCGACGCCATTTTCCTCAATAACAACAGGTTCACCTCCCACATTCCTGAGAGTTTCGGCGACTCGCCGGCGTCGGTGATCGTGATTGCCAACAACAACTTCACGGGGTGCATTCCGACAAGTATTGGGAAAATGGGGAACACGTTGAACGAGGTTTTAATGTTGAACAATGCGCTTGGTGGTTGCATCCCTGGTGAGCTTGCTCTGCTTGGAAATGCGACGGTTTTCGATGTTTCTTCGAATCAATTGAGTGGGAGCTTGCCGATGAGCTTAGATAGGTTGAAGAATGTGAAGATTATTGATGTCTCTTCCAATAGTTTGACCGGTGTGGTGCATGGAGGTGTGTGTAATTTGCCTAAATTGGCTGAGTTCACATTCGCTGATAATTTGTTTGATGCCGAAGACAATAGGTGTGTGCCTCAGAATAGACAGGATGTTTGGTTGGACGATGCTGACAATTGTTTGCAAGACAGGCCTAAGCAAAAACCGGCCGAGATTTGTAGTTCAGAGATCAGAAAGGCCGTGGATTGCAGTCGGGTTAAGTGCGGCGGAGGATCCAAACCTCCTAAACAGCCAGAGGCACCAATTGATGATCCTCATCGTCAATCACATGTCCCAATGAACCACCCTCCTCCTTCACCTGTAATCAACTCGCTCCCACCACCCCCGGTTGCCTCACCCCCACCACCGGTTGCCTCTCCACCACCACCGGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCCGTAGCCTCTCCACCACCACCACCTTCTCCATCTCCTCCTCCAGTCTCCTCTCCACTGGCACCACTAGAGGACATCATTCTTCCACCAAATTTGGGCTTCGAGTACTCATCACCGCCTCCACCATTGTTCCCAGGCTACTAA | 1545 | 51.52 | MKGSGCCLFISLLLLQSFSFFASALSDAEASSIARRQLITFLETDDLPDDYESTVVVTETFPNSRLRRAFIALQAWKRSIYSDPLNTTANWVGADVCSYTGVFCTSALDDPNVQVVAGIDLNHADIAGYLPVELGLLSDIALFHINSNRFCGLIPPSFERMILLHELDVSNNRFVGPFPEVVLRIPNLKFLDIRFNDFEGKLPHALFTKELDAIFLNNNRFTSHIPESFGDSPASVIVIANNNFTGCIPTSIGKMGNTLNEVLMLNNALGGCIPGELALLGNATVFDVSSNQLSGSLPMSLDRLKNVKIIDVSSNSLTGVVHGGVCNLPKLAEFTFADNLFDAEDNRCVPQNRQDVWLDDADNCLQDRPKQKPAEICSSEIRKAVDCSRVKCGGGSKPPKQPEAPIDDPHRQSHVPMNHPPPSPVINSLPPPPVASPPPPVASPPPPVASPPPPVASPPPPVASPPPPVASPPPPPSPSPPPVSSPLAPLEDIILPPNLGFEYSSPPPPLFPGY | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 794354 | 795898 | + | Cp4.1LG02g07240.1 | Cpe02g00154 | 464103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00154 | 514 | PRINTS | Proline rich extensin signature | 400 | 421 | - | - | |
Cpe02g00154 | 514 | PRINTS | Proline rich extensin signature | 424 | 440 | - | - | |
Cpe02g00154 | 514 | PRINTS | Proline rich extensin signature | 441 | 458 | - | - | |
Cpe02g00154 | 514 | PRINTS | Proline rich extensin signature | 461 | 486 | - | - | |
Cpe02g00154 | 514 | MobiDBLite | consensus disorder prediction | 415 | 487 | - | - | |
Cpe02g00154 | 514 | Pfam | Leucine rich repeat N-terminal domain | 72 | 104 | IPR013210 | - | |
Cpe02g00154 | 514 | Gene3D | Ribonuclease Inhibitor | 70 | 366 | IPR032675 | - | |
Cpe02g00154 | 514 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 | 3 | 509 | - | - | |
Cpe02g00154 | 514 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 3 | 509 | - | - | |
Cpe02g00154 | 514 | MobiDBLite | consensus disorder prediction | 389 | 491 | - | - | |
Cpe02g00154 | 514 | SUPERFAMILY | L domain-like | 71 | 343 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00154 | Cpe-Chr2:794354 | Cpe12g00384 | Cpe-Chr12:2744480 | 4.55E-06 | dispersed | |
Cpe02g00154 | Cpe-Chr2:794354 | Cpe17g00367 | Cpe-Chr17:2640891 | 1.31E-126 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00154 | - | - | cmax:111480794 | 790.801 |