Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00172 ATGTGCACAAGGGGTGAACATCATACGGTCTCGCTCTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAAGCGTGTCAGAGTAAGAAAGGGGAGGATTTTACGTTGGTAAAGACGGAATGCGAGAGAGTGGTTGGAGATGGAGTCTCTACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATGCGAAGGAAAATCTGTTGAACAATGTTTTAGCTGCTATTCCACCAGATCTCAACAGAGATGAATGGATTGCAGCATTACCAAGGGCCTTGGTCGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACGAACATCAGGAACCACTGTCACCTTCATGATCATTGAGGGATGGGTTATCACTGTTGCTTCTGTTGGAGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGCCATCTACTACTTATCAGCAGATCATAGACTAGAATGCAATGAAGAAGAGAGAGAACGTATAATTGCTAGTGGAGGTGAGGTAGGCCGACTGAATACAGGTGGTGGTGCAGAGATCGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCGCGATCCATTGGTGATATGGATGTTGGTGAGTTTATTGTGCCTGTTCCCTATGTGAAGCAAGTTAAGCGATGGCAACAGTGTCTTGCTAACCAAGCTAGGAGATGTGAGAGGAAATACTACCAGCAGATTTGGTTAGAGATGGGAATCACATACCAATCATTAGTCTCTGAGGTTAATCAGCTATCTTCTACTGGTGGTAGGGTTATCATATCAAGTGATGGTGTTTGGGATGCTTTATCCGCAGAAACTGCCTATGATTGTAGTCGGGGGATGCCAGCAGAAACTGCTGCTGCACAGATTGTGAAGGAAGCAGTACATTCAAAGGGACTTCGAGATGATACTACATGCATTGTGATTGACATATATCCAAGGGAGAAATCATCCACTGTTTTGCAGCCACTAAAGAAGCAGGGAAAAGGAATGTTTAAGTCAATGTTCCGCAAAAGATCTTCTGAATCATCTTCTCATTTGGGGAAGGAAAATAATGAGTTGGATGTCGTTGAAGAATTATTCGAGGAAGGATCGGCAATGCTGTCAGAAAGGTTAGATGCCAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATTTCCATATATGCTGACTCATCTAACAGAGGAAAATTGCGTGCTTGGGATGGTCCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGAGACCATCTGGAGATAGACACAGCAGTGGAAGTGACTAG 1401 44.47 MCTRGEHHTVSLSVLLKRELAIEKIERPEIVHGQACQSKKGEDFTLVKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLAAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKARTSGTTVTFMIIEGWVITVASVGDSRCTLESAEGAIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKRWQQCLANQARRCERKYYQQIWLEMGITYQSLVSEVNQLSSTGGRVIISSDGVWDALSAETAYDCSRGMPAETAAAQIVKEAVHSKGLRDDTTCIVIDIYPREKSSTVLQPLKKQGKGMFKSMFRKRSSESSSHLGKENNELDVVEELFEEGSAMLSERLDAKYPICNMFKLFVCAVCQVEIQPREGISIYADSSNRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGDRHSSGSD 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 879240 884110 + Cp4.1LG02g07080.1 Cpe02g00172 464121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00172 466 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 232 - -
Cpe02g00172 466 CDD PP2Cc 39 331 IPR001932 -
Cpe02g00172 466 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 270 461 - -
Cpe02g00172 466 SMART PP2C_4 23 329 IPR001932 -
Cpe02g00172 466 SUPERFAMILY PP2C-like 38 331 IPR036457 -
Cpe02g00172 466 PANTHER ALPHABET, ISOFORM E-RELATED 2 232 - -
Cpe02g00172 466 PANTHER ALPHABET, ISOFORM E-RELATED 270 461 - -
Cpe02g00172 466 ProSiteProfiles PPM-type phosphatase domain profile. 24 331 IPR001932 -
Cpe02g00172 466 Pfam Protein phosphatase 2C 57 235 IPR001932 -
Cpe02g00172 466 Gene3D - 31 340 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00172 Cpe06g00152 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00172 Cpe-Chr2:879240 Cpe09g00317 Cpe-Chr9:1882819 2.26E-167 dispersed
Cpe02g00172 Cpe-Chr2:879240 Cpe06g00152 Cpe-Chr6:825895 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00172 - - bhj:120085570 744.962