Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00194 ATGCTGCTTCTCAAGAACAATATGGCTGTGGAGTTTATGGTGGGTTTTGGGGACGCTGCTGCTAATTTCACGCCCAGTATGGAAGAAAATGCTGCTGTTTCTGCTGTTCAAGAAGCCGCTTCTGCTGGGATTCAGAGCGTTCATAGTTTCCTCACCTTGGTGTCTCATACTCCTAATCAACATCACTCTCAACACGATTCTTCCACTTCCACTGCTCCCGATGCTGCCGCTGGATACGAAGCCGTCGCCGATTCCGTCGTCAACAAATTCAAAAAGGTCATTTCTTTACTCGACCGGAACCGAACTGGCCATGCTCGTTTCAGAAGGGCTCCGGTTGATTCTACTGCTTCCTCTCCGCCCAAGGTCAAGCCGCAACATCAAGATCCGAGTTCGTCGTCTCCGATTTCAGTCCCTCAACTCAAGAAACAAGAATCAGTTTCTGCTTTTAAGGTTTATTGCCCCACGCCTTACTCTGTTGTGCGTTTGCCTGGTCTGCCCAACAACAACCCCCATCAGCCTTCTAATCAGCCTTCTAATCAGCCAAGTACTTTTCAACCCCAGCAGAATAACTCATCGGGGGGACTAAAAAATGGGTCTGTAAACAGAAAAGACTCAACTTCCGCCATCAATTTCGCAGCCTCGCCGTCGATTTCCGCTGCAAATTCTTATATTTCATCCTTAACCGGAGACACCGAAAGCTTACACCCATCTCTGTCATCTGGTTTTCAGTTCACCAACATGTCCCAGGTCTCTTCCGCCGGAAAGCCCCCCCTTTCTTCCTCCTCACTAAAGAGAAAATGCAATTCCATGGACGATTCCGCCAGGAAGTGCGGTTCGTCTTCAGGCCGATGTCACTGTTCCAAGAAGAGGAAAAACAGAATGAAAAGAGTGATCAGAGTTCCAGCGGTTAGTGCAAAACTTGCGGACATCCCACCGGACGATTACTCATGGAGAAAGTACGGCCAAAAACCAATTAAAGGGTCTCCTCATCCAAGGGGATATTACAAGTGTAGCAGTCTGAGAGGCTGTCCAGCACGGAAGCACGTAGAACGTGCCTTAGACGATCCAACAATGCTGATTGTTACTTACGAGAACGATCACAATCACGCCCTATCCACCCAAACACCTGCACCGCTTCTTCTCGAGTCATCATAA 1155 48.57 MLLLKNNMAVEFMVGFGDAAANFTPSMEENAAVSAVQEAASAGIQSVHSFLTLVSHTPNQHHSQHDSSTSTAPDAAAGYEAVADSVVNKFKKVISLLDRNRTGHARFRRAPVDSTASSPPKVKPQHQDPSSSSPISVPQLKKQESVSAFKVYCPTPYSVVRLPGLPNNNPHQPSNQPSNQPSTFQPQQNNSSGGLKNGSVNRKDSTSAINFAASPSISAANSYISSLTGDTESLHPSLSSGFQFTNMSQVSSAGKPPLSSSSLKRKCNSMDDSARKCGSSSGRCHCSKKRKNRMKRVIRVPAVSAKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARKHVERALDDPTMLIVTYENDHNHALSTQTPAPLLLESS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1008099 1011234 - Cp4.1LG02g06760.1 Cpe02g00194 464143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00194 384 MobiDBLite consensus disorder prediction 105 140 - -
Cpe02g00194 384 MobiDBLite consensus disorder prediction 118 140 - -
Cpe02g00194 384 ProSiteProfiles WRKY domain profile. 306 372 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g00194 384 Gene3D WRKY domain 296 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g00194 384 Pfam Plant zinc cluster domain 264 309 IPR018872 -
Cpe02g00194 384 SUPERFAMILY WRKY DNA-binding domain 309 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe02g00194 384 Pfam WRKY DNA -binding domain 313 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe02g00194 384 PANTHER WRKY TRANSCRIPTION FACTOR NTEIG-D48 28 384 - -
Cpe02g00194 384 MobiDBLite consensus disorder prediction 162 202 - -
Cpe02g00194 384 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 28 384 IPR044810 GO:0003700
Cpe02g00194 384 MobiDBLite consensus disorder prediction 165 202 - -
Cpe02g00194 384 SMART WRKY_cls 311 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00194 Cpe06g00175 CCT
Cpe02g00194 Cpe06g00175 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00194 Cpe-Chr2:1008099 Cpe02g00398 Cpe-Chr2:2230984 9.21E-73 dispersed
Cpe10g00447 Cpe-Chr10:2618206 Cpe02g00194 Cpe-Chr2:1008099 1.22E-15 wgd
Cpe19g00635 Cpe-Chr19:5145825 Cpe02g00194 Cpe-Chr2:1008099 4.92E-08 wgd
Cpe02g00194 Cpe-Chr2:1008099 Cpe06g00175 Cpe-Chr6:949236 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48981 PF03106 WRKY 3.90E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00194 - - cmo:103493562 570.466