Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe02g00199 | ATGGTTGCTTCTTTGCTGCTCAGGGGGCATCCTCTCATTCGGTTAGGGCTCAGGAACCGCGGGCTATGTACTGGGGTCGTGCGGGTGACTCGCCGGTCTTGCTGCACTGCGATGCCGGCGTCTACTCCACCGGGCGGCGGCTTATCATCTGCTGAAAATACTACCTCTGTATTGAGTGCCACTGACCCACCGAATTACCAAAGGTGGGATGAGCCTGGTTATAGAAAGTGGAAGAATCAGGAAGAGGAAATTCTCAGCGATATCGACCCTGTCATATCCCTCACAAAGGAGATCCTCCACTCCAATAGGTATGTCGATGGGGAGCGACTGACATTTGAGGATGAGAAAATTATGGTTGACAGGCTTCTTGCTCATCATCCACATGCTGAAGATAAAATTGGATGTGGACTTGAATCCATTATGGTCGATCGACACCCCCAATTTCGGCACTCCAGATGCCTCTTTGTCGTAAGGACCGATGGTGGATGGATTGACTTCTCGTATCAAAAGTGTCTTCGGGCATATATCCGAAATAAATACCCATTATATGCAGAGCGGTTTATTCGAGAACATTTCAAACGTGTGATTGGGTTTGGATCTGAGGAAAGCAGGAGGCTCCCAAATCAGAAGCATAAACCTCGCCCCAACAAAACATGCGAAGAAATGAGGCACTATACGATGGCGAGACGGCATTGTTACCCAATATCAATTCTACACTCATCAAGTTCAGGTCACCAAGACGCTTCATTTCTTCTTGATTCCCCGTTTTGCTTGGAGGAAGAGATTGGGGATGGCCTTATCCAACCAAAGGACCAAACTTTCTTAATAAATGTTTGTGTCAATTCCCCAAATTCTGTCTTCCTGTCGGAGAGGGAAGACGAGGAATTGGTGTCTCTGTTCTCTAAGGAGAACAAAAATGAGTTTCTTCATAACACTCTCTCACACAATCCCCCTTTAGCAGCCGCTCGCTCCAAGGCTGTGGCCTGGATTCTGAAGATTGACAAGCCATGGATGGCCCATCTCACCGCCATTGCTTGTTTATCTCTCGCTGCTAAAGTGGAGGAAACCCGCGTGCCCCTTCTTTTAGACCTCCAGGTGGAGGAAAATGAGTACTACTTTAAAGCTAAAACCATTAAAAAAATGGAGATTCTTGTTCTCTCTACGCTTGTTTGGAGAATGAATCCAGTGAACCCACTTTCCTTTCTGGATTATATCGTAAGACGGCTCGGGTTCAGGGACAAGCTCTGTTCTGAATTCCTCTGTAGATGTGAACGATTACTTCTCTCTGTCATCTTAGATTCTAGATTTGTATGTTTTCTTCCATCAGTCATAGCAAGCGCCATTATTTTTCAAGTTATCAACAACATAGAACCAAATGCCGCCGCCAAATGCCACGATCAGCTTCTGGGTATTCTTCAAATCGACAAGGATAAGGTAGAAGACTGTTCAAGATTCATCTCAGAAGCATCATCGAAAGAACGACACAGAAAGGACTGTAAGAATAAACGAAGATTCAGTTTAATGGACGGTCGGAATCGGAATGTCGACTGTGCTGTGTCGTCGCCGGAGACAGCAACCAAGGAGAGAAAAATTTGA | 1596 | 45.93 | MVASLLLRGHPLIRLGLRNRGLCTGVVRVTRRSCCTAMPASTPPGGGLSSAENTTSVLSATDPPNYQRWDEPGYRKWKNQEEEILSDIDPVISLTKEILHSNRYVDGERLTFEDEKIMVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRVIGFGSEESRRLPNQKHKPRPNKTCEEMRHYTMARRHCYPISILHSSSSGHQDASFLLDSPFCLEEEIGDGLIQPKDQTFLINVCVNSPNSVFLSEREDEELVSLFSKENKNEFLHNTLSHNPPLAAARSKAVAWILKIDKPWMAHLTAIACLSLAAKVEETRVPLLLDLQVEENEYYFKAKTIKKMEILVLSTLVWRMNPVNPLSFLDYIVRRLGFRDKLCSEFLCRCERLLLSVILDSRFVCFLPSVIASAIIFQVINNIEPNAAAKCHDQLLGILQIDKDKVEDCSRFISEASSKERHRKDCKNKRRFSLMDGRNRNVDCAVSSPETATKERKI | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1031220 | 1037371 | + | Cp4.1LG02g06870.1 | Cpe02g00199 | 464148 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe02g00199 | 531 | Pfam | Cyclin, N-terminal domain | 338 | 394 | IPR006671 | - | |
| Cpe02g00199 | 531 | MobiDBLite | consensus disorder prediction | 46 | 63 | - | - | |
| Cpe02g00199 | 531 | MobiDBLite | consensus disorder prediction | 39 | 64 | - | - | |
| Cpe02g00199 | 531 | Gene3D | - | 395 | 483 | - | - | |
| Cpe02g00199 | 531 | SUPERFAMILY | Cyclin-like | 397 | 505 | IPR036915 | - | |
| Cpe02g00199 | 531 | SMART | Cyclin_C_2 | 396 | 508 | IPR004367 | - | |
| Cpe02g00199 | 531 | Pfam | Cyclin, C-terminal domain | 396 | 505 | IPR004367 | - | |
| Cpe02g00199 | 531 | Gene3D | - | 85 | 177 | - | - | |
| Cpe02g00199 | 531 | SUPERFAMILY | Cyclin-like | 285 | 394 | IPR036915 | - | |
| Cpe02g00199 | 531 | Gene3D | - | 335 | 394 | - | - | |
| Cpe02g00199 | 531 | PANTHER | - | 1 | 194 | IPR044673 | - | |
| Cpe02g00199 | 531 | Pfam | Protein of unknown function (DUF3223) | 96 | 172 | - | - | |
| Cpe02g00199 | 531 | PANTHER | DCL PROTEIN (DUF3223) | 1 | 194 | - | - | |
| Cpe02g00199 | 531 | CDD | CYCLIN | 335 | 386 | IPR013763 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe02g00199 | Cpe07g00498 | CCT | |
| Cpe02g00199 | Cpe06g00180 | CCT | |
| Cpe02g00199 | Cpe07g00498 | ECH | |
| Cpe02g00199 | Cpe06g00180 | ECH | |
| Cpe02g00199 | Cpe11g00137 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g00199 | Cpe-Chr2:1031220 | Cpe06g00180 | Cpe-Chr6:976067 | 1.82E-155 | dispersed | |
| Cpe18g00795 | Cpe-Chr18:7465716 | Cpe02g00199 | Cpe-Chr2:1031220 | 1.04E-06 | dispersed | |
| Cpe01g00427 | Cpe-Chr1:2468894 | Cpe02g00199 | Cpe-Chr2:1031220 | 1.98E-59 | wgd | |
| Cpe11g00137 | Cpe-Chr11:738016 | Cpe02g00199 | Cpe-Chr2:1031220 | 1.21E-72 | wgd | |
| Cpe14g00286 | Cpe-Chr14:1670885 | Cpe02g00199 | Cpe-Chr2:1031220 | 3.07E-64 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe02g00199 | Cpe-Chr2:1031220 | 3.18E-46 | wgd | |
| Cpe19g00642 | Cpe-Chr19:5181481 | Cpe02g00199 | Cpe-Chr2:1031220 | 8.10E-55 | wgd | |
| Cpe02g00199 | Cpe-Chr2:1031220 | Cpe04g00298 | Cpe-Chr4:3757790 | 3.76E-47 | wgd | |
| Cpe02g00199 | Cpe-Chr2:1031220 | Cpe06g00179 | Cpe-Chr6:968843 | 8.71E-119 | wgd | |
| Cpe02g00199 | Cpe-Chr2:1031220 | Cpe07g00498 | Cpe-Chr7:3257734 | 1.23E-67 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe02g00199 | - | K14505 | csv:101218302 | 415.231 |