Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00204 ATGGGTACGGTCCCATTGTTGGTCCTCATTTTAGCTCTACTTCTGATTTTGAAATTCAGAAAAGCGGACCACAAAAATCTCCCACCCGGCCCGCCTTCCCTTCCAGTGATCGGCCACCTCCATCTTCTAAAAGAGCCATTCCACCAAATGCTGCAAGATCTCTCGCACAAGTACGGTCCAATCCTGTCGCTGTCACTCGGTTTCCGCCCCGTGGTGGTTGTTTCCTCCCCCGCCGCCGCCCAGGAGTGCTTTTCCAAAAACGACATCATATTTGCCAGCCGTCCTCGTATGATTTCCGGGAAGATTCTCAATTATGACTACACTGCCGTTGGTGCTACTGCTTACGGACAGCACTGGCGCATCATGCGCCGCATAGCTACCACTGAGCTACTCTCCACGTACCGTCTCAACGCATTAATTAACATCCGACAACAGGAGGTTAAATTATGGCTCAAAAGTTTATACCGAATTTCGGGCAAAAATAACGTCCGAGTGGAGATAAGGTCCAAATTGACGGAGCTGTCTTTCAATATTGCGTTGATGTTGATGGTTGGGAAGCGTTACTTTGGAGATGAAGCAGTGGATGATAGTGAGGAGGCGAGGGAGTTGAAGAACACAATGAAGCAAGTTCCTCTACTGAGCGGAGCATCGTATCCAGCTGATTTCTTGTCGGTTTTGAAATTGGTGGATTATCAAGGATTCAGGAAGAGGTTGGCTAAAGTGAGGGTGGATGGCGATGCTTTTGCTCAAAGCTTGATTGATGAACGTCGGAACAAGAAAGCGGATGACAATGAACGAAAGACCATGATTGATAGTCTCCTGTCCATGCAACAAATGGAACCTGAATACTACAAGGACGATATCATCAAGGGCCAATTCTTGAATTATACACAAAACAATGAAGAAGAAACACTGAAGACAATGGTCAATGTCCGGGACCTTTTTTACTAG 951 46.79 MGTVPLLVLILALLLILKFRKADHKNLPPGPPSLPVIGHLHLLKEPFHQMLQDLSHKYGPILSLSLGFRPVVVVSSPAAAQECFSKNDIIFASRPRMISGKILNYDYTAVGATAYGQHWRIMRRIATTELLSTYRLNALINIRQQEVKLWLKSLYRISGKNNVRVEIRSKLTELSFNIALMLMVGKRYFGDEAVDDSEEARELKNTMKQVPLLSGASYPADFLSVLKLVDYQGFRKRLAKVRVDGDAFAQSLIDERRNKKADDNERKTMIDSLLSMQQMEPEYYKDDIIKGQFLNYTQNNEEETLKTMVNVRDLFY 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1052436 1056431 - Cp4.1LG02g06600.1 Cpe02g00204 464153

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00204 316 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 Pfam Cytochrome P450 28 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 PANTHER - 22 295 - -
Cpe02g00204 316 SUPERFAMILY Cytochrome P450 28 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 Gene3D Cytochrome P450 18 310 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cpe02g00204 316 PANTHER CYTOCHROME P450 82C3-RELATED 22 295 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00204 K13260 CYP81E; isoflavone/4'-methoxyisoflavone 2'-hydroxylase [EC:1.14.14.90 1.14.14.89] - csv:101207242 430.254
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00204 Cpe-Chr2:1052436 Cpe16g00142 Cpe-Chr16:3317960 3.89E-83 dispersed
Cpe06g00184 Cpe-Chr6:991718 Cpe02g00204 Cpe-Chr2:1052436 3.26E-36 dispersed
Cpe10g01076 Cpe-Chr10:6502595 Cpe02g00204 Cpe-Chr2:1052436 6.10E-42 dispersed
Cpe02g00204 Cpe-Chr2:1052436 Cpe02g00207 Cpe-Chr2:1066865 1.58E-65 proximal
Cpe10g00457 Cpe-Chr10:2670303 Cpe02g00204 Cpe-Chr2:1052436 1.17E-68 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g698 Blo01g01509 . . . . . . . . . Cma01g01805 Cma09g00267 . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01511 Csa04g02453 . . . . . . . . . . . Cmo01g01862 . . . . . . Cpe02g00204 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe02g00204 Cpe_Chr02 FPKM 36.556217 45.169624 56.282398 48.942417 51.168766 49.830948 55.348663 63.69138 69.693771 74.487839