Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00206 | CATTCTGAAGTCGATTTGTCGGAGATCACGACGCTCTGCCAGGCGGAAAATGTGGATGAAATCCTCGTTGAGGAAATCAAAGTGCTCGCTCGAATTGCTCCATTAGCACTGCGGCAGTGCATTTACTCTGAAGCGCGGGCGGACATTTCTCGCGTATGTAACCCTAATCTTCAACTTAATCCTCATTTCCGTTTTCAGCGTTTCAAAATTTCAATCGGTGAAAGATTGGGAGACGAACGGCGTGGTTCTGTGATTCAACAGGAGCGACGCCTCGCCCGAATTTATCTCCACAGGCAATCCGCTCGCAGATTGAGGCCGTTCGGAGTTTTTTTGGTCGAAAATCGTGTTATCGGATCGGGTGAGTCGCGACGTGAGGATGGCACCGCCAGCGTCGTCTTCTTCCAATCTTCTTCCCGAAGAAAATACACAATCACTGAAAATTTCATCCACATTTTCCCATGGAGAGACCGATCCCTAGAAACATCCTCGATTGTTCCCGACGGTGATAACCGCAGTTCAGGAATCCGGCGAACCATCTGCGTTGCCGGCCCCCTTTTTCAGATCCCAGGTCGACTCTTAACTATGGCGGATAAGGAGAATATATTTCGACTCACTCGGGGTTCTAAGAAGAGGTCCGCCGAGGCTGCTACCCCCCACGATCGCTCTGCTAACAAGAGGAGAGTCGTTCTCGGAGAGCTTCCTATTTTACAGAATGCTACTTCTTCTTCCGTCGATCGGACTTCCAGGTCCAGACCCAGCAGGCAGAGACGGAGACTCAAATCGAGGGATACAGCGGAGACAAGTGCGGCCGCTCAAATTAATACGCTTCCGGATGCTGATGTCAAGCTATCGGATGAGGGCAATTCCGAAGACCCGCAAATGTGCACGGTTTTCGCCTCGGATATTTATGAGTACCTTCGCGCCATGGAGACTGATCCACGAAGAAGACCTTTACCAGATTACATCGGGAGGGTACAAAAGGATATAAGTGCCAATATGAGGGGGATTCTGGTGGATTGGTTGGTTGAAGTTGCAAAAGAATACAAGCTTGTTTCAGACACTCTTTACCTCTCTATTTCATATGTTGACAGATACTTATCTCTAAACGCAATCAGCAGGCAAAAACTTCAATTGCTGGGGGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATCAGTCCTCCGCATGTTGAAGAATTTGTTTATATAACAGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAGGCAGATATATTGAAATCACTGGAATTTGAACTTGGGAGTCCCACAATAAAGACATTTTTAAGGCAAGTGCAGTGGAGATTCACAATGATTGCTCAAGAGACTTACGAATTTAATACTTTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGTCTACTAGACTACAACTGTGTCAAATTCTTACCATCTCTCATTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAACCAAAGAAGCATCCTTGGACCTCCAGGTTGGAGCATTTTACTGGATACAAGCCAGCTGATATGAAAGATTGCGTTCTACTTGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACATAAGTACAAATTTGTGTCTATCATGCCTTCACCTCCAGAGATTCCTATTCCATATTTTGAAGATGTTAGAATATGA | 1719 | 45.26 | HSEVDLSEITTLCQAENVDEILVEEIKVLARIAPLALRQCIYSEARADISRVCNPNLQLNPHFRFQRFKISIGERLGDERRGSVIQQERRLARIYLHRQSARRLRPFGVFLVENRVIGSGESRREDGTASVVFFQSSSRRKYTITENFIHIFPWRDRSLETSSIVPDGDNRSSGIRRTICVAGPLFQIPGRLLTMADKENIFRLTRGSKKRSAEAATPHDRSANKRRVVLGELPILQNATSSSVDRTSRSRPSRQRRRLKSRDTAETSAAAQINTLPDADVKLSDEGNSEDPQMCTVFASDIYEYLRAMETDPRRRPLPDYIGRVQKDISANMRGILVDWLVEVAKEYKLVSDTLYLSISYVDRYLSLNAISRQKLQLLGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEADILKSLEFELGSPTIKTFLRQVQWRFTMIAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLIAASVIFLARFMIQPKKHPWTSRLEHFTGYKPADMKDCVLLVHDLYLSRRGGALAAIREKYKQHKYKFVSIMPSPPEIPIPYFEDVRI | 572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1058884 | 1064470 | - | Cp4.1LG02g06570.1 | Cpe02g00206 | 464155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00206 | 572 | PANTHER | CYCLIN-A3-1-RELATED | 218 | 570 | - | - | |
Cpe02g00206 | 572 | SMART | cyclin_7 | 436 | 528 | IPR013763 | - | |
Cpe02g00206 | 572 | SMART | cyclin_7 | 339 | 423 | IPR013763 | - | |
Cpe02g00206 | 572 | SUPERFAMILY | Cyclin-like | 290 | 429 | IPR036915 | - | |
Cpe02g00206 | 572 | MobiDBLite | consensus disorder prediction | 206 | 227 | - | - | |
Cpe02g00206 | 572 | PANTHER | CYCLINS | 218 | 570 | IPR039361 | - | |
Cpe02g00206 | 572 | CDD | CYCLIN | 432 | 527 | IPR013763 | - | |
Cpe02g00206 | 572 | Pfam | Cyclin, N-terminal domain | 301 | 429 | IPR006671 | - | |
Cpe02g00206 | 572 | Gene3D | - | 315 | 430 | - | - | |
Cpe02g00206 | 572 | SMART | Cyclin_C_2 | 432 | 559 | IPR004367 | - | |
Cpe02g00206 | 572 | Gene3D | - | 301 | 554 | - | - | |
Cpe02g00206 | 572 | SUPERFAMILY | Cyclin-like | 432 | 561 | IPR036915 | - | |
Cpe02g00206 | 572 | ProSitePatterns | Cyclins signature. | 334 | 365 | IPR006671 | - | |
Cpe02g00206 | 572 | MobiDBLite | consensus disorder prediction | 240 | 271 | - | - | |
Cpe02g00206 | 572 | MobiDBLite | consensus disorder prediction | 206 | 228 | - | - | |
Cpe02g00206 | 572 | CDD | CYCLIN | 333 | 422 | IPR013763 | - | |
Cpe02g00206 | 572 | Pfam | Cyclin, C-terminal domain | 432 | 558 | IPR004367 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00206 | Cpe06g00185 | CCT | |
Cpe02g00206 | Cpe07g00503 | CCT | |
Cpe02g00206 | Cpe06g00185 | ECH | |
Cpe02g00206 | Cpe07g00503 | ECH | |
Cpe02g00206 | Cpe11g00133 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00206 | Cpe-Chr2:1058884 | Cpe13g00635 | Cpe-Chr13:6074518 | 1.73E-103 | dispersed | |
Cpe11g00133 | Cpe-Chr11:725289 | Cpe02g00206 | Cpe-Chr2:1058884 | 1.01E-160 | wgd | |
Cpe15g00455 | Cpe-Chr15:5624271 | Cpe02g00206 | Cpe-Chr2:1058884 | 1.26E-86 | wgd | |
Cpe02g00206 | Cpe-Chr2:1058884 | Cpe04g00309 | Cpe-Chr4:3874502 | 9.26E-103 | wgd | |
Cpe02g00206 | Cpe-Chr2:1058884 | Cpe06g00185 | Cpe-Chr6:995417 | 0 | wgd | |
Cpe02g00206 | Cpe-Chr2:1058884 | Cpe07g00503 | Cpe-Chr7:3300135 | 5.34E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00206 | K06627 | - | csv:101207493 | 634.409 |