Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00206 CATTCTGAAGTCGATTTGTCGGAGATCACGACGCTCTGCCAGGCGGAAAATGTGGATGAAATCCTCGTTGAGGAAATCAAAGTGCTCGCTCGAATTGCTCCATTAGCACTGCGGCAGTGCATTTACTCTGAAGCGCGGGCGGACATTTCTCGCGTATGTAACCCTAATCTTCAACTTAATCCTCATTTCCGTTTTCAGCGTTTCAAAATTTCAATCGGTGAAAGATTGGGAGACGAACGGCGTGGTTCTGTGATTCAACAGGAGCGACGCCTCGCCCGAATTTATCTCCACAGGCAATCCGCTCGCAGATTGAGGCCGTTCGGAGTTTTTTTGGTCGAAAATCGTGTTATCGGATCGGGTGAGTCGCGACGTGAGGATGGCACCGCCAGCGTCGTCTTCTTCCAATCTTCTTCCCGAAGAAAATACACAATCACTGAAAATTTCATCCACATTTTCCCATGGAGAGACCGATCCCTAGAAACATCCTCGATTGTTCCCGACGGTGATAACCGCAGTTCAGGAATCCGGCGAACCATCTGCGTTGCCGGCCCCCTTTTTCAGATCCCAGGTCGACTCTTAACTATGGCGGATAAGGAGAATATATTTCGACTCACTCGGGGTTCTAAGAAGAGGTCCGCCGAGGCTGCTACCCCCCACGATCGCTCTGCTAACAAGAGGAGAGTCGTTCTCGGAGAGCTTCCTATTTTACAGAATGCTACTTCTTCTTCCGTCGATCGGACTTCCAGGTCCAGACCCAGCAGGCAGAGACGGAGACTCAAATCGAGGGATACAGCGGAGACAAGTGCGGCCGCTCAAATTAATACGCTTCCGGATGCTGATGTCAAGCTATCGGATGAGGGCAATTCCGAAGACCCGCAAATGTGCACGGTTTTCGCCTCGGATATTTATGAGTACCTTCGCGCCATGGAGACTGATCCACGAAGAAGACCTTTACCAGATTACATCGGGAGGGTACAAAAGGATATAAGTGCCAATATGAGGGGGATTCTGGTGGATTGGTTGGTTGAAGTTGCAAAAGAATACAAGCTTGTTTCAGACACTCTTTACCTCTCTATTTCATATGTTGACAGATACTTATCTCTAAACGCAATCAGCAGGCAAAAACTTCAATTGCTGGGGGTTTCTGCCATGCTCATTGCCTCAAAGTATGAAGAAATCAGTCCTCCGCATGTTGAAGAATTTGTTTATATAACAGACAATACCTACAATAGAGAAGAGGTGGTTGAGATGGAGGCAGATATATTGAAATCACTGGAATTTGAACTTGGGAGTCCCACAATAAAGACATTTTTAAGGCAAGTGCAGTGGAGATTCACAATGATTGCTCAAGAGACTTACGAATTTAATACTTTGCAATTTGAATTCTTGGGCTACTATCTTGCTGAGTTAAGTCTACTAGACTACAACTGTGTCAAATTCTTACCATCTCTCATTGCTGCATCTGTTATATTTCTAGCACGATTTATGATCCAACCAAAGAAGCATCCTTGGACCTCCAGGTTGGAGCATTTTACTGGATACAAGCCAGCTGATATGAAAGATTGCGTTCTACTTGTACATGATTTATACCTTAGTAGAAGAGGAGGCGCTTTGGCAGCTATAAGGGAGAAATACAAACAACATAAGTACAAATTTGTGTCTATCATGCCTTCACCTCCAGAGATTCCTATTCCATATTTTGAAGATGTTAGAATATGA 1719 45.26 HSEVDLSEITTLCQAENVDEILVEEIKVLARIAPLALRQCIYSEARADISRVCNPNLQLNPHFRFQRFKISIGERLGDERRGSVIQQERRLARIYLHRQSARRLRPFGVFLVENRVIGSGESRREDGTASVVFFQSSSRRKYTITENFIHIFPWRDRSLETSSIVPDGDNRSSGIRRTICVAGPLFQIPGRLLTMADKENIFRLTRGSKKRSAEAATPHDRSANKRRVVLGELPILQNATSSSVDRTSRSRPSRQRRRLKSRDTAETSAAAQINTLPDADVKLSDEGNSEDPQMCTVFASDIYEYLRAMETDPRRRPLPDYIGRVQKDISANMRGILVDWLVEVAKEYKLVSDTLYLSISYVDRYLSLNAISRQKLQLLGVSAMLIASKYEEISPPHVEEFVYITDNTYNREEVVEMEADILKSLEFELGSPTIKTFLRQVQWRFTMIAQETYEFNTLQFEFLGYYLAELSLLDYNCVKFLPSLIAASVIFLARFMIQPKKHPWTSRLEHFTGYKPADMKDCVLLVHDLYLSRRGGALAAIREKYKQHKYKFVSIMPSPPEIPIPYFEDVRI 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1058884 1064470 - Cp4.1LG02g06570.1 Cpe02g00206 464155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00206 572 PANTHER CYCLIN-A3-1-RELATED 218 570 - -
Cpe02g00206 572 SMART cyclin_7 436 528 IPR013763 -
Cpe02g00206 572 SMART cyclin_7 339 423 IPR013763 -
Cpe02g00206 572 SUPERFAMILY Cyclin-like 290 429 IPR036915 -
Cpe02g00206 572 MobiDBLite consensus disorder prediction 206 227 - -
Cpe02g00206 572 PANTHER CYCLINS 218 570 IPR039361 -
Cpe02g00206 572 CDD CYCLIN 432 527 IPR013763 -
Cpe02g00206 572 Pfam Cyclin, N-terminal domain 301 429 IPR006671 -
Cpe02g00206 572 Gene3D - 315 430 - -
Cpe02g00206 572 SMART Cyclin_C_2 432 559 IPR004367 -
Cpe02g00206 572 Gene3D - 301 554 - -
Cpe02g00206 572 SUPERFAMILY Cyclin-like 432 561 IPR036915 -
Cpe02g00206 572 ProSitePatterns Cyclins signature. 334 365 IPR006671 -
Cpe02g00206 572 MobiDBLite consensus disorder prediction 240 271 - -
Cpe02g00206 572 MobiDBLite consensus disorder prediction 206 228 - -
Cpe02g00206 572 CDD CYCLIN 333 422 IPR013763 -
Cpe02g00206 572 Pfam Cyclin, C-terminal domain 432 558 IPR004367 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00206 Cpe06g00185 CCT
Cpe02g00206 Cpe07g00503 CCT
Cpe02g00206 Cpe06g00185 ECH
Cpe02g00206 Cpe07g00503 ECH
Cpe02g00206 Cpe11g00133 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00206 Cpe-Chr2:1058884 Cpe13g00635 Cpe-Chr13:6074518 1.73E-103 dispersed
Cpe11g00133 Cpe-Chr11:725289 Cpe02g00206 Cpe-Chr2:1058884 1.01E-160 wgd
Cpe15g00455 Cpe-Chr15:5624271 Cpe02g00206 Cpe-Chr2:1058884 1.26E-86 wgd
Cpe02g00206 Cpe-Chr2:1058884 Cpe04g00309 Cpe-Chr4:3874502 9.26E-103 wgd
Cpe02g00206 Cpe-Chr2:1058884 Cpe06g00185 Cpe-Chr6:995417 0 wgd
Cpe02g00206 Cpe-Chr2:1058884 Cpe07g00503 Cpe-Chr7:3300135 5.34E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00206 K06627 - csv:101207493 634.409