Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00212 ATGAGTTGCAACGGTTGCAGAGTGCTTCGAAAGGGATGCAGTGAAGCTTGCGTTTTAAGGTCAAGTCTTCATTGGATCGACTCGCCGGAAGCTCAAGGCAACGCCACCTTATTTCTTGCTAAATTCTTCGGCCGTAGTGATCTCTTGTCCTTTATCTCCGCTGTTCCCCATCATCAGAGATCCGCTCTGTTTCAGTCTCTGTTATTCGAAGCTTGCGGCCGTACGGTCAACCCGGTGAGTGGGGCTGTTGGGCTGTTGTCGAGCGGGAATTGGCATGTCTGTCAGGCGGCGGCGGAGACGGTTCTCAGGGGCGGAGTTCCCCGGGCAAACCTCGGAATCGAATTTTCTGGAAATCCCACGGCGGAGACAGAATCCTCTCTCAGTTTGAATACGGATGTTTGGACCAGCACCACTCAGAATATTCAATTTTACCCTTCTAGTCAGTTCGATTCCCGGCGACTTTCCGATCTCAGTCTTGCCACCGGCAAGGGAAAGACCCATCCATTGGAGAATCGACGCTCTCTCGATTCAGAGGAGTCGGTGATGACTAGCTTTGGAAGCGCGGATCATAGCGACGGCGACCGGCGGAAAGAGAGGAAGCTTTTAAACTTATTCATCTGA 621 52.17 MSCNGCRVLRKGCSEACVLRSSLHWIDSPEAQGNATLFLAKFFGRSDLLSFISAVPHHQRSALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQAAAETVLRGGVPRANLGIEFSGNPTAETESSLSLNTDVWTSTTQNIQFYPSSQFDSRRLSDLSLATGKGKTHPLENRRSLDSEESVMTSFGSADHSDGDRRKERKLLNLFI 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1091004 1092373 - Cp4.1LG02g06550.1 Cpe02g00212 464161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00212 206 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Cpe02g00212 206 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Cpe02g00212 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 206 - -
Cpe02g00212 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 39-LIKE 1 206 - -
Cpe02g00212 206 MobiDBLite consensus disorder prediction 160 194 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00212 Cpe06g00193 CCT
Cpe02g00212 Cpe06g00193 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00212 Cpe-Chr2:1091004 Cpe02g01431 Cpe-Chr2:12418418 5.09E-49 dispersed
Cpe19g00663 Cpe-Chr19:5304244 Cpe02g00212 Cpe-Chr2:1091004 4.60E-64 wgd
Cpe02g00212 Cpe-Chr2:1091004 Cpe06g00193 Cpe-Chr6:1035430 2.25E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48983 PF03195 LOB 2.90E-24 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00212 - - cmax:111480976 408.297