Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00220 | ATGGAAAGTTATTTGAATGAGAATTTCGGGGACGTGAAGCCGAAGAACTCGTCGGAAGAAGCGCTTCAGAGATGGAGGCGGCTTTGCTGGTTGGTGAAGAATCGTAGAAGAAGGTTTCGATTTACTGCTAATCTCTCTAAACGATTTGAGGCTGATGCTATTAGACGCTCCATTCAGGAGAAGTTCAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTATCCTGATTACGTTGTGCCTGAAGAGGTCAGACAGGCAGGTTTCGAAATTTGTGCAGATGAAGCAGGCTCCATTGTTGACGGCCGTGATGTGAAGAAGCTGAAAATTCATGGGGGTGCAGAGGGTATTGCAACTAAGCTTGCTACATCAACGGAGACGGGCATCTCTACTACAGACCATTTGATAAAGAAAAGACAAGACATTTATGGAATTAACAAATTCACCGAAAGCCCATCTCGAGGATTTTTGCTCTTTCTTTGGGAAGCTCTCCAGGATACAACTCTAATGATACTCGCTTTCTGTGCTGTAGTTTCCCTTCTTGTTGGCATAGCGATGGAAGGATGGCCGAAGGGTGCTCATGATGGGCTCGGCATTGTTGCGAGTATCTTACTTGTTGTATTTGTCACTGCTACCAGTGACTATAGACAATCGCTTCAGTTCAAGGATTTGGACAAGGAAAAGAAGAAAATTGCGGTTCAGGTTACCCGAAATGGGTTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCATGGGTGATCAGATACCAGCAGATGGACTTTTTGTTTCAGGGTACTCTCTTCTGATAAATGAATCTAGTTTAACAGGTGAGAGCGAACCAGTTAACGTAAGTTGTCAAAACCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAGGATGGTTGTGACTTCTGTAGGCATGAGAACCCAATGGGGAAAACTGATGGCCACTCTAAGTGAAGGAGGAGATGACGAGACTCCTTTGCAGGTAAAGCTAAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGATTGTTCACTCGCAAGCTACGAGAAGGGTCTTACTTCAGCTGGTCCGGAGATGAAGCAATGGAAGTTTTGGAATTTTTTGCTGTTGCCGTAACTATTGTTGTGGTTGCTGTGCCCGAAGGGCTGCCTTTGGCGGTGACACTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAACGATAAGGCACTTGTCAGGCACTTAGCTGCTTGTGAGACGATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATCTGCACTAAGGTCAAGGAAGTTGGCAATTCTAGTAAGTGTTCTGATTATCGTTCAGAACTTCCCGACTCCGCTGTTGGTATTTTATTGCAATCGATATTTAACAACACCGGTGGAGAAATCGTCAAGAACAAAGATGGCGAGAATGAGATACTTGGGACGCCCACCGAATCTGCTCTTCTGGAATTCGGCCTTCTGCTTGGTGGGGATTTTCAGAAAGAACGCCAAAAGTCAAAGATCGCGAGAGTCGATCCCTTCAATTCTGTGAAGAAACGAATGGGTGTTGTTTTGGAGCTCCCAGCCGGTGGCTTCCGCGCACACAGCAAAGGTGCTTCAGAGATCGTTTTGGCTTCATGCGACAAATTTCTTGACTCGAACGGTGAGGCAGTTCCTCTCAATGAAGAGTCCATCAACTTTTTGAAGGAAACGATCGAAGAATTTGCGGGAGAAGCTCTTCGAACATTGTGCTTGGCTTACATGGACATTGATGGTGAGTATCAGTCTGAAAGTCCGATTCCCATGAGTGGCTACACGTGCATAGGAATTGTTGGTATTAAGGATCCCGTTCGTCCGGGTGTCAAGGAGTCTGTTGCAATTTGCAAGGCCGCCGGTATAACCGTACGGATGGTTACGGGAGATAACATCACCACCGCAAAAGCAATAGCCAGGGAATGTGGAATCTTGACTGACGATGGCATAGCAATTGAAGGTCCTGAATTCCGTGAGAAGGAGGAAGAGTGGAGTGAAATAATACCAAAAATTCAGGTCATGGCTCGATCTTCACCAATGGATAAACATACTCTTGTAAAGCACTTACGGACCACTTTTCAAGAAGTTGTTGCAGTGGCAAAAGAGAGTGCTGATGTAATAATTCTCGATGACAACTTCTCTACAATTGCTACTGTTGCCAAATGGGGACGTTCAGTTTACATAAACATCCAGAAATTCGTTCAGTTTCAGCTAACTGTGAATGTGGTTGCCCTCATCGTCAATTTTTCTTCAGCCTGTTTGACAGGAAATGCTCCCCTCACTGCTGTGCAACTGCTATGGGTCAATATGATAATGGATACACTAGGAGCACTTGCATTGGCAACTGAACCTCCTACTGATGACTTGATGAAGAGATTGCCAGTTGGTCGGAAAGGGAATTTCATCAGCAACGTGATGTGGAGAAATATCTTGGGGCAGTCAATATATCAGTTTGTAATAGTTTGGTTTCTCCAGACAAGAGGGCAGGCTCTTTTTCATCTTGATGGCCCAGACTCTGAATTGATACTGAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGATAAGCTCAAGAGACATGGAGAAGATAAATGTGCTTGAAGGAATATTGAAGAACTATGTCTTTGTGGCAGTTCTCGCTTGCACTGTACTTTTCCAGATCATAATCATCCAATTCCTGGGAACATTTGCAAACACCTATCCTCTAAACTCCCAGCAATGGTTTGTCACCGTGTTGTTTGGATTTCTTGGCATGCCAGTTGCAGCAGCGTTGAAGATGATTCCGGTAGGATCACACTGA | 2979 | 44.34 | MESYLNENFGDVKPKNSSEEALQRWRRLCWLVKNRRRRFRFTANLSKRFEADAIRRSIQEKFRVAVLVSQAALQFINGLDLYPDYVVPEEVRQAGFEICADEAGSIVDGRDVKKLKIHGGAEGIATKLATSTETGISTTDHLIKKRQDIYGINKFTESPSRGFLLFLWEALQDTTLMILAFCAVVSLLVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIAVQVTRNGLRQKISIYELLPGDIVHLAMGDQIPADGLFVSGYSLLINESSLTGESEPVNVSCQNPFLLSGTKVQDGSCRMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLREGSYFSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICTKVKEVGNSSKCSDYRSELPDSAVGILLQSIFNNTGGEIVKNKDGENEILGTPTESALLEFGLLLGGDFQKERQKSKIARVDPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKFLDSNGEAVPLNEESINFLKETIEEFAGEALRTLCLAYMDIDGEYQSESPIPMSGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKEEEWSEIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNILGQSIYQFVIVWFLQTRGQALFHLDGPDSELILNTLIFNAFVFCQVFNEISSRDMEKINVLEGILKNYVFVAVLACTVLFQIIIIQFLGTFANTYPLNSQQWFVTVLFGFLGMPVAAALKMIPVGSH | 992 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1131171 | 1136016 | - | Cp4.1LG02g06580.1 | Cpe02g00220 | 464169 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00220 | 992 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 988 | IPR023298 | - | |
Cpe02g00220 | 992 | PANTHER | CATION TRANSPORTING ATPASE | 754 | 990 | - | - | |
Cpe02g00220 | 992 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 334 | IPR008250 | - | |
Cpe02g00220 | 992 | Gene3D | - | 17 | 77 | - | - | |
Cpe02g00220 | 992 | PRINTS | P-type cation-transporting ATPase superfamily signature | 454 | 468 | - | - | |
Cpe02g00220 | 992 | PRINTS | P-type cation-transporting ATPase superfamily signature | 752 | 764 | - | - | |
Cpe02g00220 | 992 | PRINTS | P-type cation-transporting ATPase superfamily signature | 285 | 299 | - | - | |
Cpe02g00220 | 992 | PRINTS | P-type cation-transporting ATPase superfamily signature | 653 | 664 | - | - | |
Cpe02g00220 | 992 | PRINTS | P-type cation-transporting ATPase superfamily signature | 675 | 685 | - | - | |
Cpe02g00220 | 992 | Pfam | E1-E2 ATPase | 237 | 432 | - | - | |
Cpe02g00220 | 992 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 387 | 476 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe02g00220 | 992 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 206 | 377 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe02g00220 | 992 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
Cpe02g00220 | 992 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 3 | 754 | - | - | |
Cpe02g00220 | 992 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 754 | 990 | - | - | |
Cpe02g00220 | 992 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 111 | 754 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Cpe02g00220 | 992 | PANTHER | CATION TRANSPORTING ATPASE | 3 | 754 | - | - | |
Cpe02g00220 | 992 | Pfam | Cation transport ATPase (P-type) | 515 | 593 | - | - | |
Cpe02g00220 | 992 | Gene3D | - | 752 | 990 | - | - | |
Cpe02g00220 | 992 | PRINTS | Sodium/potassium-transporting ATPase signature | 204 | 224 | - | - | |
Cpe02g00220 | 992 | PRINTS | Sodium/potassium-transporting ATPase signature | 447 | 468 | - | - | |
Cpe02g00220 | 992 | PRINTS | Sodium/potassium-transporting ATPase signature | 944 | 964 | - | - | |
Cpe02g00220 | 992 | PRINTS | Sodium/potassium-transporting ATPase signature | 578 | 596 | - | - | |
Cpe02g00220 | 992 | SMART | Cation_ATPase_N_a_2 | 120 | 191 | IPR004014 | - | |
Cpe02g00220 | 992 | Pfam | Cation transporter/ATPase, N-terminus | 119 | 186 | IPR004014 | - | |
Cpe02g00220 | 992 | Gene3D | - | 512 | 652 | IPR023299 | GO:0000166 | |
Cpe02g00220 | 992 | Pfam | Cation transporting ATPase, C-terminus | 813 | 987 | IPR006068 | - | |
Cpe02g00220 | 992 | SUPERFAMILY | HAD-like | 442 | 772 | IPR036412 | - | |
Cpe02g00220 | 992 | Gene3D | - | 212 | 312 | - | - | |
Cpe02g00220 | 992 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 460 | 665 | IPR023299 | GO:0000166 | |
Cpe02g00220 | 992 | Gene3D | - | 653 | 751 | IPR023214 | - | |
Cpe02g00220 | 992 | Pfam | haloacid dehalogenase-like hydrolase | 651 | 754 | - | - | |
Cpe02g00220 | 992 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
Cpe02g00220 | 992 | Gene3D | - | 169 | 505 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00220 | Cpe06g00200 | CCT | |
Cpe02g00220 | Cpe06g00200 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00220 | Cpe-Chr2:1131171 | Cpe03g00476 | Cpe-Chr3:2792960 | 0 | dispersed | |
Cpe19g00675 | Cpe-Chr19:5367407 | Cpe02g00220 | Cpe-Chr2:1131171 | 0 | wgd | |
Cpe02g00220 | Cpe-Chr2:1131171 | Cpe06g00200 | Cpe-Chr6:1073086 | 1.65E-27 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00220 | K01537 | - | csv:101221694 | 1808.5 |