Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00220 ATGGAAAGTTATTTGAATGAGAATTTCGGGGACGTGAAGCCGAAGAACTCGTCGGAAGAAGCGCTTCAGAGATGGAGGCGGCTTTGCTGGTTGGTGAAGAATCGTAGAAGAAGGTTTCGATTTACTGCTAATCTCTCTAAACGATTTGAGGCTGATGCTATTAGACGCTCCATTCAGGAGAAGTTCAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTATCCTGATTACGTTGTGCCTGAAGAGGTCAGACAGGCAGGTTTCGAAATTTGTGCAGATGAAGCAGGCTCCATTGTTGACGGCCGTGATGTGAAGAAGCTGAAAATTCATGGGGGTGCAGAGGGTATTGCAACTAAGCTTGCTACATCAACGGAGACGGGCATCTCTACTACAGACCATTTGATAAAGAAAAGACAAGACATTTATGGAATTAACAAATTCACCGAAAGCCCATCTCGAGGATTTTTGCTCTTTCTTTGGGAAGCTCTCCAGGATACAACTCTAATGATACTCGCTTTCTGTGCTGTAGTTTCCCTTCTTGTTGGCATAGCGATGGAAGGATGGCCGAAGGGTGCTCATGATGGGCTCGGCATTGTTGCGAGTATCTTACTTGTTGTATTTGTCACTGCTACCAGTGACTATAGACAATCGCTTCAGTTCAAGGATTTGGACAAGGAAAAGAAGAAAATTGCGGTTCAGGTTACCCGAAATGGGTTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCATGGGTGATCAGATACCAGCAGATGGACTTTTTGTTTCAGGGTACTCTCTTCTGATAAATGAATCTAGTTTAACAGGTGAGAGCGAACCAGTTAACGTAAGTTGTCAAAACCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAGGATGGTTGTGACTTCTGTAGGCATGAGAACCCAATGGGGAAAACTGATGGCCACTCTAAGTGAAGGAGGAGATGACGAGACTCCTTTGCAGGTAAAGCTAAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGATTGTTCACTCGCAAGCTACGAGAAGGGTCTTACTTCAGCTGGTCCGGAGATGAAGCAATGGAAGTTTTGGAATTTTTTGCTGTTGCCGTAACTATTGTTGTGGTTGCTGTGCCCGAAGGGCTGCCTTTGGCGGTGACACTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAACGATAAGGCACTTGTCAGGCACTTAGCTGCTTGTGAGACGATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATCTGCACTAAGGTCAAGGAAGTTGGCAATTCTAGTAAGTGTTCTGATTATCGTTCAGAACTTCCCGACTCCGCTGTTGGTATTTTATTGCAATCGATATTTAACAACACCGGTGGAGAAATCGTCAAGAACAAAGATGGCGAGAATGAGATACTTGGGACGCCCACCGAATCTGCTCTTCTGGAATTCGGCCTTCTGCTTGGTGGGGATTTTCAGAAAGAACGCCAAAAGTCAAAGATCGCGAGAGTCGATCCCTTCAATTCTGTGAAGAAACGAATGGGTGTTGTTTTGGAGCTCCCAGCCGGTGGCTTCCGCGCACACAGCAAAGGTGCTTCAGAGATCGTTTTGGCTTCATGCGACAAATTTCTTGACTCGAACGGTGAGGCAGTTCCTCTCAATGAAGAGTCCATCAACTTTTTGAAGGAAACGATCGAAGAATTTGCGGGAGAAGCTCTTCGAACATTGTGCTTGGCTTACATGGACATTGATGGTGAGTATCAGTCTGAAAGTCCGATTCCCATGAGTGGCTACACGTGCATAGGAATTGTTGGTATTAAGGATCCCGTTCGTCCGGGTGTCAAGGAGTCTGTTGCAATTTGCAAGGCCGCCGGTATAACCGTACGGATGGTTACGGGAGATAACATCACCACCGCAAAAGCAATAGCCAGGGAATGTGGAATCTTGACTGACGATGGCATAGCAATTGAAGGTCCTGAATTCCGTGAGAAGGAGGAAGAGTGGAGTGAAATAATACCAAAAATTCAGGTCATGGCTCGATCTTCACCAATGGATAAACATACTCTTGTAAAGCACTTACGGACCACTTTTCAAGAAGTTGTTGCAGTGGCAAAAGAGAGTGCTGATGTAATAATTCTCGATGACAACTTCTCTACAATTGCTACTGTTGCCAAATGGGGACGTTCAGTTTACATAAACATCCAGAAATTCGTTCAGTTTCAGCTAACTGTGAATGTGGTTGCCCTCATCGTCAATTTTTCTTCAGCCTGTTTGACAGGAAATGCTCCCCTCACTGCTGTGCAACTGCTATGGGTCAATATGATAATGGATACACTAGGAGCACTTGCATTGGCAACTGAACCTCCTACTGATGACTTGATGAAGAGATTGCCAGTTGGTCGGAAAGGGAATTTCATCAGCAACGTGATGTGGAGAAATATCTTGGGGCAGTCAATATATCAGTTTGTAATAGTTTGGTTTCTCCAGACAAGAGGGCAGGCTCTTTTTCATCTTGATGGCCCAGACTCTGAATTGATACTGAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGATAAGCTCAAGAGACATGGAGAAGATAAATGTGCTTGAAGGAATATTGAAGAACTATGTCTTTGTGGCAGTTCTCGCTTGCACTGTACTTTTCCAGATCATAATCATCCAATTCCTGGGAACATTTGCAAACACCTATCCTCTAAACTCCCAGCAATGGTTTGTCACCGTGTTGTTTGGATTTCTTGGCATGCCAGTTGCAGCAGCGTTGAAGATGATTCCGGTAGGATCACACTGA 2979 44.34 MESYLNENFGDVKPKNSSEEALQRWRRLCWLVKNRRRRFRFTANLSKRFEADAIRRSIQEKFRVAVLVSQAALQFINGLDLYPDYVVPEEVRQAGFEICADEAGSIVDGRDVKKLKIHGGAEGIATKLATSTETGISTTDHLIKKRQDIYGINKFTESPSRGFLLFLWEALQDTTLMILAFCAVVSLLVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIAVQVTRNGLRQKISIYELLPGDIVHLAMGDQIPADGLFVSGYSLLINESSLTGESEPVNVSCQNPFLLSGTKVQDGSCRMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLREGSYFSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICTKVKEVGNSSKCSDYRSELPDSAVGILLQSIFNNTGGEIVKNKDGENEILGTPTESALLEFGLLLGGDFQKERQKSKIARVDPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKFLDSNGEAVPLNEESINFLKETIEEFAGEALRTLCLAYMDIDGEYQSESPIPMSGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKEEEWSEIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNILGQSIYQFVIVWFLQTRGQALFHLDGPDSELILNTLIFNAFVFCQVFNEISSRDMEKINVLEGILKNYVFVAVLACTVLFQIIIIQFLGTFANTYPLNSQQWFVTVLFGFLGMPVAAALKMIPVGSH 992
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1131171 1136016 - Cp4.1LG02g06580.1 Cpe02g00220 464169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00220 992 SUPERFAMILY Calcium ATPase, transmembrane domain M 119 988 IPR023298 -
Cpe02g00220 992 PANTHER CATION TRANSPORTING ATPASE 754 990 - -
Cpe02g00220 992 SUPERFAMILY Calcium ATPase, transduction domain A 239 334 IPR008250 -
Cpe02g00220 992 Gene3D - 17 77 - -
Cpe02g00220 992 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Cpe02g00220 992 PRINTS P-type cation-transporting ATPase superfamily signature 752 764 - -
Cpe02g00220 992 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Cpe02g00220 992 PRINTS P-type cation-transporting ATPase superfamily signature 653 664 - -
Cpe02g00220 992 PRINTS P-type cation-transporting ATPase superfamily signature 675 685 - -
Cpe02g00220 992 Pfam E1-E2 ATPase 237 432 - -
Cpe02g00220 992 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe02g00220 992 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 206 377 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe02g00220 992 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Cpe02g00220 992 PANTHER CALCIUM-TRANSPORTING ATPASE 3 754 - -
Cpe02g00220 992 PANTHER CALCIUM-TRANSPORTING ATPASE 754 990 - -
Cpe02g00220 992 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 111 754 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cpe02g00220 992 PANTHER CATION TRANSPORTING ATPASE 3 754 - -
Cpe02g00220 992 Pfam Cation transport ATPase (P-type) 515 593 - -
Cpe02g00220 992 Gene3D - 752 990 - -
Cpe02g00220 992 PRINTS Sodium/potassium-transporting ATPase signature 204 224 - -
Cpe02g00220 992 PRINTS Sodium/potassium-transporting ATPase signature 447 468 - -
Cpe02g00220 992 PRINTS Sodium/potassium-transporting ATPase signature 944 964 - -
Cpe02g00220 992 PRINTS Sodium/potassium-transporting ATPase signature 578 596 - -
Cpe02g00220 992 SMART Cation_ATPase_N_a_2 120 191 IPR004014 -
Cpe02g00220 992 Pfam Cation transporter/ATPase, N-terminus 119 186 IPR004014 -
Cpe02g00220 992 Gene3D - 512 652 IPR023299 GO:0000166
Cpe02g00220 992 Pfam Cation transporting ATPase, C-terminus 813 987 IPR006068 -
Cpe02g00220 992 SUPERFAMILY HAD-like 442 772 IPR036412 -
Cpe02g00220 992 Gene3D - 212 312 - -
Cpe02g00220 992 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 665 IPR023299 GO:0000166
Cpe02g00220 992 Gene3D - 653 751 IPR023214 -
Cpe02g00220 992 Pfam haloacid dehalogenase-like hydrolase 651 754 - -
Cpe02g00220 992 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Cpe02g00220 992 Gene3D - 169 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00220 Cpe06g00200 CCT
Cpe02g00220 Cpe06g00200 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00220 Cpe-Chr2:1131171 Cpe03g00476 Cpe-Chr3:2792960 0 dispersed
Cpe19g00675 Cpe-Chr19:5367407 Cpe02g00220 Cpe-Chr2:1131171 0 wgd
Cpe02g00220 Cpe-Chr2:1131171 Cpe06g00200 Cpe-Chr6:1073086 1.65E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00220 K01537 - csv:101221694 1808.5