Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00229 | ATGATCGTGCTCTCCGCCGCCGCTGCAGGCTCATTCTGGAGTGTGAAGTATCTGCCAGGATTTTCAGGGCCTCCTCCGTTTGAACTCGAAACTGGATATGTCGGTGTGGGGGATTTGGAGGAAGTTCAGGTGTTCTATTACTTTGTGAAGTCCCAAGGAAATCCCCAAACCGATCCTCTAATGACATGGCTCATCGGAGGTCCCGGTTGCTCTGCTCTCTCTGGATTCGCCGTGGAAATCGGTCCAGTAAATTTCAAGATAGAGCCATACAATGGAAGCACACCTCAACTGATCTTGAATCCCCATTCATGGACCAAGAAAGCCAGTATATTATTTATAGATATGCCTGTGGGCACTGGATTTTCATATGCTCGAACTCCACAAGGCTTGAAGAAAGGAGATCTAGTACAAGTTCAACAAAATCATCAATTTTTGCGAAAGTGGCTGACTGATCACCCAGAGTTCATTCCTAATCCATTTTACGTCGGTGGGGACTCGTATTCTGGTATCATTATTCCACCTCTTACTCAAGCAATTTCAGAAGGAAATAAACATCTCTTCCCAGCTATAAACCTTCAGGGATACATAGAAGGAAATCCTTTTAGTGTACGTAGAACAGTTAATAATTATAGGGTTCATTATGCTCATAAGATGTCCTTCATCTCTGATGAACTATATGAGTCATTGAAAACTAGTTGCAAAGGAGAATTTGAGCGTATCGATCCAACTAATTTGGAGTGCATCAAACATGTTTCTACGTATAAAAAGTGTGTGAGTAGAATCAGTTTAGCATGTATTATGTGTCCTTATTGTACCGATGCTTCTCGAGTGCCAGAAAATACGTTTGGTGGGCAGAGATCCCTCTATGATACATCCCAAAATCTGTTTCTGGCTCCTAGAGTGTTACCTCCTCTTTCTCTTGACTGTGATGAGTATAAATACTACCTTAGTTATTATTGGGCCAACGACGATCAAGTTCGGAAAGCACTTCATATACGCAAGGGAACGGTTGGAGAATGGTTTAGATGCGAAAGTAAAAAAGATTATCAATTTGATATTACGAATGTTCTTCCTTATCACGTGAATCTTAGCTCCAAAGATTATCGATCTTTGATTTTTAGTGGGGATCATGATATGATGGTGCCGATTCTAGACACTGAAGCATGGATCAAGTCTCTAAATTATTCCATTGTCGATGAGTGGAGACCTTGGTTTGACGATGAAGATCAAGTACTTGGGTACACGAGAACTTTTGCAAACAACATGACATTTGCCACGATAAAAGGTGGAGGGCACACACCACAAACAATGCAATACCAAACTAGCATAATGTTTAATAGATGGATAGCCCGAAAATCCTTCTGTACAAATAAAGGGAAAGTACTCGAAAAGCGGGTGCACATTTTCTTGAATTTCTCCAATGGCCACTCCGGGTGGTTTCAGGTGCTCTCCGCCGCCTCCGCCGCCGCAGGATCATTCTGGAGTGTGAAGTATCTGCCAGGATTTTCAGGGCCTCTTCCATTTGAACTCGAAACTGGATACGTGGGTGTGGGAGATTCGGAGGAAGTTCAGATGTTCTATTACTTTGTGAAGTCCCAAGGAAATCCCCGAACCGATCCTCTAATGACATGGTACATCGGCGGTCCAGGTTGCTCTGCACTCTGTGGCTTTGCCTTGGAAATTGGCCCTCTAAACTTCAAGATAGAGCCATACAATGGAAGCTTACCTCAATTAATCTTGAATCCCCATACATGGACTAAGAAAGGAGATGTACTACAAATTGAACAAAATCATCAATTTTTGCGGAAGTGGCTGGCTGATCATCCAGAATTCATTCGTAACCCATTTTATGTTGGTGGTGGCTCATATTCTGGTATGATTGTTCCCTCTCTTACTCAAGCAATCTCAGAAGGTAATAGCCATGGCTTCCCAATTATAAACCTTCAGGGATACATAGAGGGCAATCCTTTCAGTGTGCATAAAACAAATGATAATTATAAGATTCCATATGCTCATAGGATGTCCTTCATCTCTGATGAACTATACGAGTCATTGAAAAGCAGCTGCAAAGGAGAATATCTTAATTGCGTGAGTAGAATCAACACGGGGAATATTTTGAAGCCTCATTGTGAGGATGCTACTAAAGTGACGGAAGCTGCTACGTTTAATGATGCGAGGAGATCCCTCTACAATGCTTCTGAACAACAGTTTCTTTCTCCCGGAGTGTTGCCTTCGATTCCTCTCGAGTGTGATGAGTACGCGTTTTACCTCAGTTATTATTGGGCTAATGACGATCGAGTTCGAAAAGCTCTCCATATACGTGAGGGAACGATTGGAGAATGGTTTAGATGTCAAAGTACAAAAGATTACCAGTATGATTTCGTAAGTATGGTTCCTTATCATATGAATCTTAGCTCTAAGGGCTACAAGTCTTTGATTTTTAGCGGGGATCATGATATGGAGGTGCCGATTTTAGACACCGAAGCATGGATCAAATCTCTAAATTATCCTCTTATTGATGAATGGAGGCCTTGGTTTAACGAGGAGGATCAAATTCTTGGGTACACGAGGACTTATGCAAACAACATGACATTTGTATCCATAAAAGGAGGAGGACACACACCACAAACCATGCAGAACCAAAGTGGCATAATGTTTAGTAGATGGATAGCTGGAGATCCCTTATAA | 2688 | 42.0 | MIVLSAAAAGSFWSVKYLPGFSGPPPFELETGYVGVGDLEEVQVFYYFVKSQGNPQTDPLMTWLIGGPGCSALSGFAVEIGPVNFKIEPYNGSTPQLILNPHSWTKKASILFIDMPVGTGFSYARTPQGLKKGDLVQVQQNHQFLRKWLTDHPEFIPNPFYVGGDSYSGIIIPPLTQAISEGNKHLFPAINLQGYIEGNPFSVRRTVNNYRVHYAHKMSFISDELYESLKTSCKGEFERIDPTNLECIKHVSTYKKCVSRISLACIMCPYCTDASRVPENTFGGQRSLYDTSQNLFLAPRVLPPLSLDCDEYKYYLSYYWANDDQVRKALHIRKGTVGEWFRCESKKDYQFDITNVLPYHVNLSSKDYRSLIFSGDHDMMVPILDTEAWIKSLNYSIVDEWRPWFDDEDQVLGYTRTFANNMTFATIKGGGHTPQTMQYQTSIMFNRWIARKSFCTNKGKVLEKRVHIFLNFSNGHSGWFQVLSAASAAAGSFWSVKYLPGFSGPLPFELETGYVGVGDSEEVQMFYYFVKSQGNPRTDPLMTWYIGGPGCSALCGFALEIGPLNFKIEPYNGSLPQLILNPHTWTKKGDVLQIEQNHQFLRKWLADHPEFIRNPFYVGGGSYSGMIVPSLTQAISEGNSHGFPIINLQGYIEGNPFSVHKTNDNYKIPYAHRMSFISDELYESLKSSCKGEYLNCVSRINTGNILKPHCEDATKVTEAATFNDARRSLYNASEQQFLSPGVLPSIPLECDEYAFYLSYYWANDDRVRKALHIREGTIGEWFRCQSTKDYQYDFVSMVPYHMNLSSKGYKSLIFSGDHDMEVPILDTEAWIKSLNYPLIDEWRPWFNEEDQILGYTRTYANNMTFVSIKGGGHTPQTMQNQSGIMFSRWIAGDPL | 895 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1172604 | 1179793 | - | Cp4.1LG02g06380.1 | Cpe02g00229 | 464178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00229 | 895 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 6 | 452 | - | - | |
Cpe02g00229 | 895 | Gene3D | alpha/beta hydrolase | 494 | 595 | IPR029058 | - | |
Cpe02g00229 | 895 | ProSiteProfiles | Pestivirus NS3 protease (NS3pro) domain profile. | 1 | 33 | IPR000280 | GO:0004252 | |
Cpe02g00229 | 895 | Gene3D | alpha/beta hydrolase | 20 | 464 | IPR029058 | - | |
Cpe02g00229 | 895 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 589 | 892 | - | - | |
Cpe02g00229 | 895 | PANTHER | SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED | 486 | 594 | - | - | |
Cpe02g00229 | 895 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 589 | 892 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 486 | 594 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | SUPERFAMILY | alpha/beta-Hydrolases | 15 | 452 | IPR029058 | - | |
Cpe02g00229 | 895 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 422 | 435 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 148 | 173 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 100 | 112 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 113 | 123 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | Pfam | Serine carboxypeptidase | 19 | 450 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | Pfam | Serine carboxypeptidase | 595 | 892 | IPR001563 | GO:0004185|GO:0006508 | |
Cpe02g00229 | 895 | Gene3D | alpha/beta hydrolase | 596 | 712 | IPR029058 | - | |
Cpe02g00229 | 895 | Gene3D | - | 751 | 895 | - | - | |
Cpe02g00229 | 895 | SUPERFAMILY | alpha/beta-Hydrolases | 496 | 892 | IPR029058 | - | |
Cpe02g00229 | 895 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 6 | 452 | IPR001563 | GO:0004185|GO:0006508 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00229 | Cpe06g00210 | CCT | |
Cpe02g00229 | Cpe06g00210 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00229 | Cpe-Chr2:1172604 | Cpe12g00844 | Cpe-Chr12:7478378 | 2.27E-29 | dispersed | |
Cpe02g00943 | Cpe-Chr2:7884544 | Cpe02g00229 | Cpe-Chr2:1172604 | 3.56E-18 | transposed | |
Cpe12g01143 | Cpe-Chr12:9401184 | Cpe02g00229 | Cpe-Chr2:1172604 | 3.46E-86 | transposed | |
Cpe02g00229 | Cpe-Chr2:1172604 | Cpe06g00210 | Cpe-Chr6:1107553 | 1.21E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00229 | K16296 | - | sly:101252581 | 857.055 |