Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00229 ATGATCGTGCTCTCCGCCGCCGCTGCAGGCTCATTCTGGAGTGTGAAGTATCTGCCAGGATTTTCAGGGCCTCCTCCGTTTGAACTCGAAACTGGATATGTCGGTGTGGGGGATTTGGAGGAAGTTCAGGTGTTCTATTACTTTGTGAAGTCCCAAGGAAATCCCCAAACCGATCCTCTAATGACATGGCTCATCGGAGGTCCCGGTTGCTCTGCTCTCTCTGGATTCGCCGTGGAAATCGGTCCAGTAAATTTCAAGATAGAGCCATACAATGGAAGCACACCTCAACTGATCTTGAATCCCCATTCATGGACCAAGAAAGCCAGTATATTATTTATAGATATGCCTGTGGGCACTGGATTTTCATATGCTCGAACTCCACAAGGCTTGAAGAAAGGAGATCTAGTACAAGTTCAACAAAATCATCAATTTTTGCGAAAGTGGCTGACTGATCACCCAGAGTTCATTCCTAATCCATTTTACGTCGGTGGGGACTCGTATTCTGGTATCATTATTCCACCTCTTACTCAAGCAATTTCAGAAGGAAATAAACATCTCTTCCCAGCTATAAACCTTCAGGGATACATAGAAGGAAATCCTTTTAGTGTACGTAGAACAGTTAATAATTATAGGGTTCATTATGCTCATAAGATGTCCTTCATCTCTGATGAACTATATGAGTCATTGAAAACTAGTTGCAAAGGAGAATTTGAGCGTATCGATCCAACTAATTTGGAGTGCATCAAACATGTTTCTACGTATAAAAAGTGTGTGAGTAGAATCAGTTTAGCATGTATTATGTGTCCTTATTGTACCGATGCTTCTCGAGTGCCAGAAAATACGTTTGGTGGGCAGAGATCCCTCTATGATACATCCCAAAATCTGTTTCTGGCTCCTAGAGTGTTACCTCCTCTTTCTCTTGACTGTGATGAGTATAAATACTACCTTAGTTATTATTGGGCCAACGACGATCAAGTTCGGAAAGCACTTCATATACGCAAGGGAACGGTTGGAGAATGGTTTAGATGCGAAAGTAAAAAAGATTATCAATTTGATATTACGAATGTTCTTCCTTATCACGTGAATCTTAGCTCCAAAGATTATCGATCTTTGATTTTTAGTGGGGATCATGATATGATGGTGCCGATTCTAGACACTGAAGCATGGATCAAGTCTCTAAATTATTCCATTGTCGATGAGTGGAGACCTTGGTTTGACGATGAAGATCAAGTACTTGGGTACACGAGAACTTTTGCAAACAACATGACATTTGCCACGATAAAAGGTGGAGGGCACACACCACAAACAATGCAATACCAAACTAGCATAATGTTTAATAGATGGATAGCCCGAAAATCCTTCTGTACAAATAAAGGGAAAGTACTCGAAAAGCGGGTGCACATTTTCTTGAATTTCTCCAATGGCCACTCCGGGTGGTTTCAGGTGCTCTCCGCCGCCTCCGCCGCCGCAGGATCATTCTGGAGTGTGAAGTATCTGCCAGGATTTTCAGGGCCTCTTCCATTTGAACTCGAAACTGGATACGTGGGTGTGGGAGATTCGGAGGAAGTTCAGATGTTCTATTACTTTGTGAAGTCCCAAGGAAATCCCCGAACCGATCCTCTAATGACATGGTACATCGGCGGTCCAGGTTGCTCTGCACTCTGTGGCTTTGCCTTGGAAATTGGCCCTCTAAACTTCAAGATAGAGCCATACAATGGAAGCTTACCTCAATTAATCTTGAATCCCCATACATGGACTAAGAAAGGAGATGTACTACAAATTGAACAAAATCATCAATTTTTGCGGAAGTGGCTGGCTGATCATCCAGAATTCATTCGTAACCCATTTTATGTTGGTGGTGGCTCATATTCTGGTATGATTGTTCCCTCTCTTACTCAAGCAATCTCAGAAGGTAATAGCCATGGCTTCCCAATTATAAACCTTCAGGGATACATAGAGGGCAATCCTTTCAGTGTGCATAAAACAAATGATAATTATAAGATTCCATATGCTCATAGGATGTCCTTCATCTCTGATGAACTATACGAGTCATTGAAAAGCAGCTGCAAAGGAGAATATCTTAATTGCGTGAGTAGAATCAACACGGGGAATATTTTGAAGCCTCATTGTGAGGATGCTACTAAAGTGACGGAAGCTGCTACGTTTAATGATGCGAGGAGATCCCTCTACAATGCTTCTGAACAACAGTTTCTTTCTCCCGGAGTGTTGCCTTCGATTCCTCTCGAGTGTGATGAGTACGCGTTTTACCTCAGTTATTATTGGGCTAATGACGATCGAGTTCGAAAAGCTCTCCATATACGTGAGGGAACGATTGGAGAATGGTTTAGATGTCAAAGTACAAAAGATTACCAGTATGATTTCGTAAGTATGGTTCCTTATCATATGAATCTTAGCTCTAAGGGCTACAAGTCTTTGATTTTTAGCGGGGATCATGATATGGAGGTGCCGATTTTAGACACCGAAGCATGGATCAAATCTCTAAATTATCCTCTTATTGATGAATGGAGGCCTTGGTTTAACGAGGAGGATCAAATTCTTGGGTACACGAGGACTTATGCAAACAACATGACATTTGTATCCATAAAAGGAGGAGGACACACACCACAAACCATGCAGAACCAAAGTGGCATAATGTTTAGTAGATGGATAGCTGGAGATCCCTTATAA 2688 42.0 MIVLSAAAAGSFWSVKYLPGFSGPPPFELETGYVGVGDLEEVQVFYYFVKSQGNPQTDPLMTWLIGGPGCSALSGFAVEIGPVNFKIEPYNGSTPQLILNPHSWTKKASILFIDMPVGTGFSYARTPQGLKKGDLVQVQQNHQFLRKWLTDHPEFIPNPFYVGGDSYSGIIIPPLTQAISEGNKHLFPAINLQGYIEGNPFSVRRTVNNYRVHYAHKMSFISDELYESLKTSCKGEFERIDPTNLECIKHVSTYKKCVSRISLACIMCPYCTDASRVPENTFGGQRSLYDTSQNLFLAPRVLPPLSLDCDEYKYYLSYYWANDDQVRKALHIRKGTVGEWFRCESKKDYQFDITNVLPYHVNLSSKDYRSLIFSGDHDMMVPILDTEAWIKSLNYSIVDEWRPWFDDEDQVLGYTRTFANNMTFATIKGGGHTPQTMQYQTSIMFNRWIARKSFCTNKGKVLEKRVHIFLNFSNGHSGWFQVLSAASAAAGSFWSVKYLPGFSGPLPFELETGYVGVGDSEEVQMFYYFVKSQGNPRTDPLMTWYIGGPGCSALCGFALEIGPLNFKIEPYNGSLPQLILNPHTWTKKGDVLQIEQNHQFLRKWLADHPEFIRNPFYVGGGSYSGMIVPSLTQAISEGNSHGFPIINLQGYIEGNPFSVHKTNDNYKIPYAHRMSFISDELYESLKSSCKGEYLNCVSRINTGNILKPHCEDATKVTEAATFNDARRSLYNASEQQFLSPGVLPSIPLECDEYAFYLSYYWANDDRVRKALHIREGTIGEWFRCQSTKDYQYDFVSMVPYHMNLSSKGYKSLIFSGDHDMEVPILDTEAWIKSLNYPLIDEWRPWFNEEDQILGYTRTYANNMTFVSIKGGGHTPQTMQNQSGIMFSRWIAGDPL 895
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1172604 1179793 - Cp4.1LG02g06380.1 Cpe02g00229 464178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00229 895 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 6 452 - -
Cpe02g00229 895 Gene3D alpha/beta hydrolase 494 595 IPR029058 -
Cpe02g00229 895 ProSiteProfiles Pestivirus NS3 protease (NS3pro) domain profile. 1 33 IPR000280 GO:0004252
Cpe02g00229 895 Gene3D alpha/beta hydrolase 20 464 IPR029058 -
Cpe02g00229 895 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 589 892 - -
Cpe02g00229 895 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 1-RELATED 486 594 - -
Cpe02g00229 895 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 589 892 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 486 594 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 SUPERFAMILY alpha/beta-Hydrolases 15 452 IPR029058 -
Cpe02g00229 895 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 173 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 PRINTS Carboxypeptidase C serine protease (S10) family signature 100 112 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 123 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 Pfam Serine carboxypeptidase 19 450 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 Pfam Serine carboxypeptidase 595 892 IPR001563 GO:0004185|GO:0006508
Cpe02g00229 895 Gene3D alpha/beta hydrolase 596 712 IPR029058 -
Cpe02g00229 895 Gene3D - 751 895 - -
Cpe02g00229 895 SUPERFAMILY alpha/beta-Hydrolases 496 892 IPR029058 -
Cpe02g00229 895 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 452 IPR001563 GO:0004185|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00229 Cpe06g00210 CCT
Cpe02g00229 Cpe06g00210 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00229 Cpe-Chr2:1172604 Cpe12g00844 Cpe-Chr12:7478378 2.27E-29 dispersed
Cpe02g00943 Cpe-Chr2:7884544 Cpe02g00229 Cpe-Chr2:1172604 3.56E-18 transposed
Cpe12g01143 Cpe-Chr12:9401184 Cpe02g00229 Cpe-Chr2:1172604 3.46E-86 transposed
Cpe02g00229 Cpe-Chr2:1172604 Cpe06g00210 Cpe-Chr6:1107553 1.21E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00229 K16296 - sly:101252581 857.055