Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00257 ATGTCGAAAATGAAGCATCTTCTTCGAAAGCTTCACATCGGTGGGGGACTTAATGAGCATCAGCGATTGAGCGATTCCCAACCCGCGACGCGACCCACTTCGACCCCATGCCCCAATAGTAATTCATCGGTGTCGCCTTCTTCTGGGTCCTCCTCCTCTGTGGCTATGCCGTCTTCCACTACAATGGAGGCCGTTGAATCGGTGGTTGATCGGACCGCTTCTGGCGATGTGGATGGTGGCTGCGTCGATTTCAATGCTTTGGAGGAGGAGTTTCAGATGCAATTGGCTATGGCGATTAGCGCTTCCGATCCTGATTCGAGACAAGACACTGAGTCCGCTCAGATCGATGCCGCTAAGCGGATGAGCCTTGGCTGTTCCCCTTCCATCTCCGGCAGTAAAGCCCTCGCTGAATTTCTCTCCCTACAGTATTGGAGCTATAATGTTGTAAATTATGATGAAAAAGTGATGGATGGATTTTATGACTTATATGGCATTACTGCGAACTCTAGCACCCGAGGAAAGATGCCACTGTTAGTGGATCTTAAAGAAATATGTGTTACAGGTGATATCGATTACGAAGTGATTTTGGTGAACCGCTTGCTTGATCCTGAGCTTCAACAGTTGGAGAGACAAGCATATAACATATTCATGGATTGCGGAGTTTCTGAACATGGCTTCATTTTAAGTGGCCTGGTTCAAAAACTTGCTGATGTAGTTGTTGCTAGAATGGGTGGTCCTGTTGGGGACGCTGAAGAAATGTTGAGAAGGTGGACCCTCAGGAGTTATGAGTTGCGTAGTTCTTTGAACACGATTATTCTACCACTTGGACGCCTTGATATTGGACTTGCACGTCATAGAGCTTTGCTTTTTAAGGTGCTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGATGGAGCTGTGAATATGATCAAAGTTGATAATGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACACTAATTCCATCAGAGGCACCCAGCGGTCAATTTTCGAATTATGGCTTTGATAGGAGACCCGCAGATGTTATAGCAGTTCCTGAAGATACACCGGTATTAAAAAATGAAGGAGCTGAAGCTGTATTGATTTCATCTACTCAAGATGGAGTAGAAAATGTTTGCAACTTAGTATCCAAAGAAGCTTCAGATTTAGGTGTTCAATCAAAAGAAAACGGCAGAAACTTTATTGAAGCAATTCTAAATGGGAGTTCGGATTATGATTTTGAGAAGCTTCTAGAATCAGAAAGCAGTGCATTTGAAAGTTCATCAGGTGCATGTGCACAGTCGGCATCTGCACAAAAGAAGAAAGTTAAAAAGGTATCGAAGTATGTCATTAGTGCTGCAAAGAACCCAGAGTTTGCACAGAAATTACATGCTGTATTGTTAGAGAGTGGTGCATCACCTCCTGCAGATTTGTTTTCGGATATAGATTCACAGGGAAATGGTGAAAGGAAAGCGATTCACCAAATGTATCCAATCAACGGGAAAGGCATGGATGTTGGGCTTCAGTGTAACCCTTTTGTGTTGGCAAGCCAGGGACAGTCTTTTGCTGAAGCCGAGTATTTGAACAATATTGTCCATGAAAATAAGCAGAAAGCGTCTACTGTGGGATCAACGGAAGAACAAAAACCTGAGGCAAATGCGAACAATCACGGCACTTTTTGGCCTCAGAGTATGAATGAGGGGTTTGTGTTTGTTGATGTTAATGGTGAAGCAGTTAAATTGGTTGATGTTAATGGGACTCTTCATCGTGAACATGTGGATGGTGTTTCGTTAACCTCTGTTGCCAATTCTCATAAAAAACAACTAGGAAGTACCTTAGTGGATGAAGAAAGAAGATGGTTGCAAGATAATCGTGAGAGTCGTGAGAGTCCATCAGAAAATTTGATAGAACTTGATGATAGTAACCTGCATGCTAGTGATGGCCACAGCGAGACGATCAACCCGATATTAGGCGAAGTTGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGTATTGGTATAGGATCGTATGGCGAGGTTTATCGAGCAGATTGGAATGGGACTGAAGTTGCTGTGAAGAAGTTCTTAGACCAAGATTTTTCCGGTGCTGCTTTGGTCCAATTAAAATGTGAAGTTGAAATCATGTTAAGACTGAGGCATCCTAATGTTGTCCTTTTCATGGGAGCAGTCACTCGCCCTCCTCATTTTTCAATCCTCACAGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGTCCCAATTCTCAACTCGATGAAAGGAGGCGACTGAGAATGGCTTTCGATGTGGCCAAAGGAATGAACTACTTACACACAAGTCATCCAACCATTGTTCATAGAGATCTGAAGTCCCCCAATCTCCTCGTTGATAAAAACTGGGTTGTCAAGGTTTGTGATTTTGGGTTGTCACGTGTCAAGCAGAACACGTTTCTGTCTTCAAAGTCAACTGCTGGAACGCCCGAATGGATGGCGCCAGAAGTTCTAAGGAATGAACCGGCCGATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGACGACATGTCGCATACCGTGGAAAGGTTTGAACCCAATGCAGGTTGTAGGAGCTGTAGGATTCCAAAATAGGCGCCTGGAAATCCCAGAAGATGTTGATCCAGCAGTAGCACAGATCATTTGCGATTGTTGGCAAACGGACACGCAACTGAGGCCGTCATTCTCTCAGCTTATTACTCGATTACGACGTCTTCAACGGCTTGTTCGGAAAACAAACTCCGGGAATCTAATATCGGAGTGA 2859 44.0 MSKMKHLLRKLHIGGGLNEHQRLSDSQPATRPTSTPCPNSNSSVSPSSGSSSSVAMPSSTTMEAVESVVDRTASGDVDGGCVDFNALEEEFQMQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSISGSKALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTGDIDYEVILVNRLLDPELQQLERQAYNIFMDCGVSEHGFILSGLVQKLADVVVARMGGPVGDAEEMLRRWTLRSYELRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKVDNGSEYIIDLMGAPGTLIPSEAPSGQFSNYGFDRRPADVIAVPEDTPVLKNEGAEAVLISSTQDGVENVCNLVSKEASDLGVQSKENGRNFIEAILNGSSDYDFEKLLESESSAFESSSGACAQSASAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIDSQGNGERKAIHQMYPINGKGMDVGLQCNPFVLASQGQSFAEAEYLNNIVHENKQKASTVGSTEEQKPEANANNHGTFWPQSMNEGFVFVDVNGEAVKLVDVNGTLHREHVDGVSLTSVANSHKKQLGSTLVDEERRWLQDNRESRESPSENLIELDDSNLHASDGHSETINPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLRMAFDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPADEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPAVAQIICDCWQTDTQLRPSFSQLITRLRRLQRLVRKTNSGNLISE 952
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1330695 1337874 - Cp4.1LG02g06190.1 Cpe02g00257 464206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00257 952 ProSiteProfiles Protein kinase domain profile. 682 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00257 952 Pfam Protein tyrosine and serine/threonine kinase 682 934 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 SMART serkin_6 682 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe02g00257 952 Gene3D Transferase(Phosphotransferase) domain 1 761 947 - -
Cpe02g00257 952 MobiDBLite consensus disorder prediction 13 65 - -
Cpe02g00257 952 CDD STKc_MAP3K-like 688 931 - -
Cpe02g00257 952 SUPERFAMILY Protein kinase-like (PK-like) 664 932 IPR011009 -
Cpe02g00257 952 Gene3D Phosphorylase Kinase; domain 1 675 759 - -
Cpe02g00257 952 PANTHER SERINE-THREONINE PROTEIN KINASE 76 945 - -
Cpe02g00257 952 Pfam Ethylene-responsive protein kinase Le-CTR1 136 340 - -
Cpe02g00257 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Cpe02g00257 952 PRINTS Tyrosine kinase catalytic domain signature 756 769 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 PRINTS Tyrosine kinase catalytic domain signature 795 813 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 PRINTS Tyrosine kinase catalytic domain signature 842 852 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 PRINTS Tyrosine kinase catalytic domain signature 861 883 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 PRINTS Tyrosine kinase catalytic domain signature 905 927 IPR001245 GO:0004672|GO:0006468
Cpe02g00257 952 MobiDBLite consensus disorder prediction 20 65 - -
Cpe02g00257 952 ProSitePatterns Protein kinases ATP-binding region signature. 688 710 IPR017441 GO:0005524
Cpe02g00257 952 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 76 945 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00257 Cpe06g00238 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00257 Cpe-Chr2:1330695 Cpe20g00145 Cpe-Chr20:821271 1.82E-82 dispersed
Cpe05g01514 Cpe-Chr5:10427365 Cpe02g00257 Cpe-Chr2:1330695 8.40E-60 dispersed
Cpe04g00031 Cpe-Chr4:317721 Cpe02g00257 Cpe-Chr2:1330695 7.24E-70 transposed
Cpe18g00079 Cpe-Chr18:2046181 Cpe02g00257 Cpe-Chr2:1330695 2.15E-68 transposed
Cpe02g00257 Cpe-Chr2:1330695 Cpe06g00238 Cpe-Chr6:1261090 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62201 PF07714 PK_Tyr_Ser-Thr 7.40E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00257 K04424 - csv:101214554 1564.67