Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00266 ATGGGGGGTTCTGGGAAATGGATGAAGGTTCTTATAGGACAGAGGAAGTCTGATAAGGAAGACAATGTGAGCAAAACTAAGAAATGGAGGCTATGGAGGAGCCCTTCAGGGGATTTGAGCTCTGCTTGGAAGGCTTATAAAGGGGCACATAAGACAGCTTCTGAAGGCTCTCATTCTCCTCGAGCCCCTGATTCTTTCACCGTCGCTGTCGCCACCGTCCTCCGTGCTCCGCCCAAAGATTTCAGGCTTGTTCGCCAAGAATGGGCTGCAATTCGTATCCAAACTGCATTTCGCGGTTTCTTGTCTAGGAGGGCTCTTAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTGGTGAGGGGTCGTTTGGTGAGGAAGCAGGCAGCTGTTACCCTTAGGTGCATGCAGGCTTTGGTTCGAGTTCAAGCTCGAGTCAGGGCTCGTCGTGTGAGGATGTCGGTCGAGGGGCAGGCTGTGCAGCAATTGCTTGATGTACATCGCAGCAGGGCTGATCTCTTGAAGCAAGCTGAGGAGGGTTGGTGTGATAGCAAAGGGACATTGGAAGATATCAAAGCTAAGTTACAAATGAGGCAAGATGGAGCATTTAAGAGGGAGAGAGCCATTGCATACTCTCTTGTTCAAAAGCAATTGAAGGCAACACCAAGCTCAACCTTGCGAACGGATGCTTCGGTTTACGCTCTTAAGAATTATAAGTTCGACAAGAACAATTGGGGATGGAGTTGGTTGGAGAGATGGATGGTGGCGAAGCCATGGGAGACGAGGTTGATGGAACAATCTCGCACTGATTCGATTGAAGTCACTCCACCTTCAAAGAGCTGTACAGAGTCTGTTTTGTCTAAATATTCCAAAGGTTCTGAACCAAGTTTGGTGAAAGTTCGGAAGAACAATGTATCAACTAGGATATCTGCTAGACCTCCCTCAAGTGGGCAAACTCGTTCTTGTTCTAGCCCAAGTTCTGATTTCTGGTATGATGAGAGCTCTGCTTCATCTTCAATCTGCACATCGACGACTCCCGTTTCAGGGCATGCTTTCTCAACCATAGAAAGAACAGATAACAGCAGTAACAGTAGGCCGAGTTACATGAACCTTACCGAGTCAACAAGGGCGAAGCAGAAGACAAATAGTCACTTGTCGCTCCGAATTCAAAGGCAGTCCATGGATGAATTTCAATTCCTTAAGAAGTCGGCAGCTTTCTCCAATGGGGATTCTAAGAGCAGTGCTGGCTCTGATTCATCAGTCAACCCCTTCAAGCCATTGATGCTGCCAACACAACTGGGTAAGAATGGAACAAAGCTAAGGTCATGA 1326 48.04 MGGSGKWMKVLIGQRKSDKEDNVSKTKKWRLWRSPSGDLSSAWKAYKGAHKTASEGSHSPRAPDSFTVAVATVLRAPPKDFRLVRQEWAAIRIQTAFRGFLSRRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSVEGQAVQQLLDVHRSRADLLKQAEEGWCDSKGTLEDIKAKLQMRQDGAFKRERAIAYSLVQKQLKATPSSTLRTDASVYALKNYKFDKNNWGWSWLERWMVAKPWETRLMEQSRTDSIEVTPPSKSCTESVLSKYSKGSEPSLVKVRKNNVSTRISARPPSSGQTRSCSSPSSDFWYDESSASSSICTSTTPVSGHAFSTIERTDNSSNSRPSYMNLTESTRAKQKTNSHLSLRIQRQSMDEFQFLKKSAAFSNGDSKSSAGSDSSVNPFKPLMLPTQLGKNGTKLRS 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1377504 1381318 - Cp4.1LG02g06000.1 Cpe02g00266 464215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00266 441 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Cpe02g00266 441 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Cpe02g00266 441 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Cpe02g00266 441 MobiDBLite consensus disorder prediction 405 441 - -
Cpe02g00266 441 MobiDBLite consensus disorder prediction 405 425 - -
Cpe02g00266 441 MobiDBLite consensus disorder prediction 266 285 - -
Cpe02g00266 441 MobiDBLite consensus disorder prediction 351 382 - -
Cpe02g00266 441 MobiDBLite consensus disorder prediction 267 285 - -
Cpe02g00266 441 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 436 - -
Cpe02g00266 441 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Cpe02g00266 441 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Cpe02g00266 441 SMART iq_5 108 129 IPR000048 GO:0005515
Cpe02g00266 441 SMART iq_5 85 107 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00266 Cpe-Chr2:1377504 Cpe18g00224 Cpe-Chr18:3887819 8.13E-67 dispersed
Cpe12g00611 Cpe-Chr12:6065899 Cpe02g00266 Cpe-Chr2:1377504 3.71E-75 wgd
Cpe02g00266 Cpe-Chr2:1377504 Cpe06g00243 Cpe-Chr6:1295976 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00266 - - csv:101210019 756.518