Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00281 ATGAGCCTGAATGCAGCGGAGGATGAATCGACTTCAGAAATTCATATTCCAGCAGAGATTGATTGGGATATGTTAGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACTGCTCTTTACCCTATTGTTGTTTTGAAAACTCGGCTTCAGGTTTCTGCTACTAAGCTATCAAGCTTTAACATGTCATATTCTATCATGCGCCATGAAGGTTTAAGAGGGTTTTACCGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGACAGCTCTTGAAGTTACCAAGAGTGGCGTTGGTAGTGCAACGGTTAGATTAGGCTTTTCAGACACCACAGCCATGGCTATAGCTAATGGAGCTGCTGGGTTGAGCTCGGCTATGGCTGCTCAATTGGTCTGGACTCCCATAGATGTTGTGAGCCAAAGACTAATGGTTCAGGGCTGCAATAACAGTGCTAAAAACCTTAATTCTTGCGTCTATAAGAATGGTATTGACGCGTTTCGAAAGATCGTTTATGCGGATGGTTTTCGAGGATTATATAGAGGATTTGGGATATCAATCTTGACATATGCTCCATCAAATGCTGTTTGGTGGGCTTCTTACTCTGTAGCTCACAGGCTTATTTGGAGTGGTTTAGGCTACTACAATAGTAAGAAGGATGAGAGTTTTAATACTGCTGGGTATGCCTTTAAACCAGATTCTAAGGCAACAGTGGCTATTCAGGGCTTGAGTGCAGCCTTGGCCAGTGGGGTTTCTGCTATCATAACAATGCCTCTAGATACCATCAAGACTAGATTGCAAGTTTTGGATGGAGAAGAAAATGGTCAAAGACGACCCCTAACGGCATTGCAGACCGTAAGAAACTTGATGAAGGAAGGTGGGTTGAATGCCTGTTACAGAGGGCTCGGGCCAAGGTGGGCGTCGATGGCTATGTCGGCCACCACCATGATCACGACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATTGCTTGAGCTGA 1038 44.22 MSLNAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSATKLSSFNMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMTALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNNSAKNLNSCVYKNGIDAFRKIVYADGFRGLYRGFGISILTYAPSNAVWWASYSVAHRLIWSGLGYYNSKKDESFNTAGYAFKPDSKATVAIQGLSAALASGVSAIITMPLDTIKTRLQVLDGEENGQRRPLTALQTVRNLMKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDCLS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1456039 1457076 + Cp4.1LG02g05950.1 Cpe02g00281 464230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00281 345 Gene3D Mitochondrial carrier domain 28 343 IPR023395 -
Cpe02g00281 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Cpe02g00281 345 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 343 - -
Cpe02g00281 345 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Cpe02g00281 345 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 343 - -
Cpe02g00281 345 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Cpe02g00281 345 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Cpe02g00281 345 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Cpe02g00281 345 Pfam Mitochondrial carrier protein 247 340 IPR018108 -
Cpe02g00281 345 Pfam Mitochondrial carrier protein 36 107 IPR018108 -
Cpe02g00281 345 Pfam Mitochondrial carrier protein 126 218 IPR018108 -
Cpe02g00281 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Cpe02g00281 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00281 Cpe06g00253 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00281 Cpe-Chr2:1456039 Cpe17g00470 Cpe-Chr17:3502403 6.95E-160 dispersed
Cpe12g00598 Cpe-Chr12:5973612 Cpe02g00281 Cpe-Chr2:1456039 1.30E-160 wgd
Cpe02g00281 Cpe-Chr2:1456039 Cpe06g00253 Cpe-Chr6:1347418 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00281 K15121 - csv:101213436 608.216