Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00286 ATGGATGTGAACGGGAATAAACCTTTGAAACCTATTCGAAGAAGCTCATCGCAGAAGGAAAGTGAAAATGGAAGCCAAGTAGTTGTTGAAATTAGCAGAGATGAAAATGGGTACTCTGTTCCGAAGCAAAACAGAGTCGATTCACAGACCAAAGAGCCGACGGATTCGAGTATTGGCTATGGCTACGACTCGCATCTCACTCCGACGGCGAATAAACCCCCGAAAATCCCCGGTTCAGTTGGAACCCTCACGCCTAGAAAATCCCTCAAAAGATCAATCCTATCGAAACCCAAATCCAGATTCGGGGAACAATCAAGCTTCATTGATTCAGATACGTTTGAGGAGAATCGTTTGTCGTTGAGAGATCAAATCAGTGCAAATTCATCGAGACGTTCTACTCTCAACACGCCGAAGGAACATCATGAGGAAGGAGATGACGATATTTTCAAGATAGAGAAGTTTAAGAAAGAGAAGCACAAGAAAGTGAAGGTAATAACATTGATTAAATGGGTTGGAGCTTTTTGCATCATTGGTTGCTTGGTAGCTAGCTTGACTATTAAACGTTTGAAGAAATACTTCCTTTGGGGTATAGAGATTTGGAAATGGTGTTTGCTTGCTACTGTGATTTTGTGTGGAATGATATTTACTCATCGGGTTATGAACGTGATTGTGTTCTTGATTGAGAGGAACTTTTTGCTTCAGAAAAAAGTGTTCTATTTTGTTCATGGGTTGAAGAAGAGTGTCCAAGTGACCCTTTGGTTGACATTGGTTCTTGTTACATGGGTGTCTTTGTTTGATCGGAGTAGCCATAGGGTCTTGAGATCAAAGATCAGTGGGAAGATTTTGGATGCCATTACATGGACCCTAATAACACTTCTGATAGGAGCATTTTTGTGGTTGATAAAGACACTGTTGTTGAAAATACTGGCCTCCAAGTTCCATATGAACCGATTTTTCGACAGAATTCAGGAATCCATTTTCCATCATCATGTTCTTCAAACCCTTTTGAACCCTTCACCAATTGGCATGCCTGAAAGTACTGTCGAGTCCAACAGTGGTCGATTGAGTTTCAAGGGTAAAAAATCCGACCATAAGAAGGTGATTGACTTGGGAAAGATTCATCAGCTGAAGCGAGAGAAGGTTTCGGCATGGACGATGAAGGTTTTGGTCGATGCAGTTGCAAGTTCGGAGATGTCGATCTCACAATTACTTGACGAAAGCTACCAAGTTGCTGACGGTGAGATCACCGATGAGACGGAGGTTGCTGGATATGCTGCCTTCAAGATCTTCAACAACATTGCTCTTCCTGGAAACGATTTCATAGAGGAAGAGGATCTTCGGAGAGTTATGATCAAAGAAGAAGTTGATCTTGTTCTTCCACTCTTTGAGGTAGATGAGACAAGGAGGATTGACTGGAAATCTCTAACAAATTGGGTGTTAAAGGTATATAAAGAGAGGAAAACACTAGCACATGCCTTGAAAGACACTAAAACAGCTGTGAAGCAATTGAACAATTTGGTAACAGTGCTTCTGATCATAGTAACAGCTATTATTTGGCTTCTGTTGATGGAAATTGCTACAACCAAAGTACTCGTCTTCCTCCTATCTCAACTTGCAGTGGCTGTCTTCATGTTTGGAAACACTTGCAAGACTATCTTTGAAGCTCTAGTCTTTGTGTTTGTTATGCATCCATTTGATGTCGGGGACCGTTGCGCTGTCGAGGGCGTCCCGTTGATGGTTGAAGAAATGAATATCTTGACAACAGTCTTCTTGAAACTCAACAATGAGAAAGTGTATTATCCCAACTCAGTTTTGGCAACAAAGTCGATCACGAATTACTACAGAAGTCCAGACATGAGCGACACGGTAGAATTCTCGATCGGTTTCGCAACGCCATTGGAGAGGATCGGGCTCATGAAAGACAGAATAAGGAGATATTTGGAGAAGAATCCACAACACTGGCATCCAAATCATAGTGTGGTGGTGAAGGAGATCGAAGACGTGAACAAGATAAAGTTTGCTCTTTATTCGAACCACACGATGAATTTCCAGGATTGGACGGAGAAGAATCGTCGAAGAACCGAGCTGGTGATGGAGTTGAAGAGAATTTTCGAAGAACTGAAGATCAACTACAATCTTCTACCTCAAACAGTTCATCTCTTCCCAGCTGAGGGGCACTGA 2181 42.04 MDVNGNKPLKPIRRSSSQKESENGSQVVVEISRDENGYSVPKQNRVDSQTKEPTDSSIGYGYDSHLTPTANKPPKIPGSVGTLTPRKSLKRSILSKPKSRFGEQSSFIDSDTFEENRLSLRDQISANSSRRSTLNTPKEHHEEGDDDIFKIEKFKKEKHKKVKVITLIKWVGAFCIIGCLVASLTIKRLKKYFLWGIEIWKWCLLATVILCGMIFTHRVMNVIVFLIERNFLLQKKVFYFVHGLKKSVQVTLWLTLVLVTWVSLFDRSSHRVLRSKISGKILDAITWTLITLLIGAFLWLIKTLLLKILASKFHMNRFFDRIQESIFHHHVLQTLLNPSPIGMPESTVESNSGRLSFKGKKSDHKKVIDLGKIHQLKREKVSAWTMKVLVDAVASSEMSISQLLDESYQVADGEITDETEVAGYAAFKIFNNIALPGNDFIEEEDLRRVMIKEEVDLVLPLFEVDETRRIDWKSLTNWVLKVYKERKTLAHALKDTKTAVKQLNNLVTVLLIIVTAIIWLLLMEIATTKVLVFLLSQLAVAVFMFGNTCKTIFEALVFVFVMHPFDVGDRCAVEGVPLMVEEMNILTTVFLKLNNEKVYYPNSVLATKSITNYYRSPDMSDTVEFSIGFATPLERIGLMKDRIRRYLEKNPQHWHPNHSVVVKEIEDVNKIKFALYSNHTMNFQDWTEKNRRRTELVMELKRIFEELKINYNLLPQTVHLFPAEGH 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1478648 1482958 + Cp4.1LG02g05890.1 Cpe02g00286 464235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00286 726 PIRSF Memb_At2g17000 5 724 IPR016688 -
Cpe02g00286 726 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 22 720 IPR016688 -
Cpe02g00286 726 MobiDBLite consensus disorder prediction 1 84 - -
Cpe02g00286 726 Pfam Mechanosensitive ion channel 504 710 IPR006685 GO:0016020|GO:0055085
Cpe02g00286 726 Coils Coil 724 726 - -
Cpe02g00286 726 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 22 720 - -
Cpe02g00286 726 SUPERFAMILY Sm-like ribonucleoproteins 554 613 IPR010920 -
Cpe02g00286 726 MobiDBLite consensus disorder prediction 18 64 - -
Cpe02g00286 726 Gene3D - 564 613 IPR023408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00286 Cpe-Chr2:1478648 Cpe12g00061 Cpe-Chr12:359718 2.83E-163 dispersed
Cpe18g00332 Cpe-Chr18:4787006 Cpe02g00286 Cpe-Chr2:1478648 0 wgd
Cpe02g00286 Cpe-Chr2:1478648 Cpe04g01033 Cpe-Chr4:9154023 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00286 K22048 - csv:101217197 1036.56