Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00287 ATGGTTTCAGAACTGGAAGCCTCCGTTTCAGGTGACTCAGGTCCCAGCTCAGTAGCAGGTCCCTCCCACTCCCACCCCGGCGGTCCTCACCGTTTTCCTCTTGCTGCTCAGCCGGAGATCATGCGAGCTGCAGAGAAGGACGATCAGTACGCCTCTTTTGTTTATGACGCCTGTCGCGACGCTTTCCGCCACCTCTTTGGTCTGCTACGCCGACTCTTGAACCTTTACCTTCTTTGTTTCATTTCCAATTTGATTGTTATGCTTTCTCAGCTCTTGTTCTTCGAATTTGGAATTTCTGGCTTCAATTTTCTGTTTATTCGTCTAGGCTATACTTGCTTTTCTTTATTATACTTTCTGATTGTATTGCTAGAGTGTTTCGATGATAACTCCTCTTCTTGCTGTAGGGATAATTCCGCTGTAATTTGCGCTCGACTTGCTGTGGCATATCAGAGTGAGACAAAGCTTCTCGGACAGATGCTGTATTATGTGTTAACAACTGGGTCAGGACAACAAACACTTGGTGAAGAGTATTGTGATATCAATCAGGTTTCTGGACCTTATGGACTTCCTCCAAACCCAGCAAGACGTGCTCTTTTCATTGTGTACCAGACAGCTGTTCCATATATTGCTGAAAGAATAAGCTCTAGAGTTGCTTCTCGTGGTATCATGCTTGCTGATTCTCTGTCTGACGAGTTCTATGGAGATAATGCCTCTTCTCGGTCTTTATTAAACATGGAAATCCAACCTTCTTCAACCCCAGAGTATTCGGGTTCTTACCTAACGAGAGTGAAGGCGAAAATTAATCGATTATGGCTGCAAACAGTGCGATGCTGGCCTTCGATTTTGCCTCTAGTTCGTGAATTTTTGCAATTGGCTCTTCGTACAAACCTCATGTTTTTCTATTTTGAAGGACTGTACTATCATATATCCAAACGAGCTGCAGGCATTCGCTATGTGTTCATTGGAAAACCATCTAATCAAAGGCCCAGATACCAAATACTTGGAGTGTTTCTACTGATTCAACTTTGTATCATTGCTGCCGAAGGCTTAAGACGTAGTAGTTTATCATCTGTTTCAAGTTCAATTAACCCGACATCCTTTGGAGCAAATCCTAGTTCATCAGGTCGTGGTCTGCCAATTTTAAATGAGGAAGGCAATCTAATATCTGTTGATGGGGACTCTGGAAATTTGGTCTCTGATCCTTCGCACAGTGAGTCTAATAGAGGTAGTGGAATAAGCAAATGCACGCTGTGTCTGAGTAATCGCCAACACCCAACTGCCACACCTTGTGGCCATGTATTCTGCTGGAACTGCATAATGGAATGGTGCAATGAAAAACCTGAATGCCCGCTGTGCAGAACTCCCATTAATCATTCAACCTTAGTTTGTCTATATCATTCTGACTTCTGA 1410 43.62 MVSELEASVSGDSGPSSVAGPSHSHPGGPHRFPLAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGLLRRLLNLYLLCFISNLIVMLSQLLFFEFGISGFNFLFIRLGYTCFSLLYFLIVLLECFDDNSSSCCRDNSAVICARLAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDINQVSGPYGLPPNPARRALFIVYQTAVPYIAERISSRVASRGIMLADSLSDEFYGDNASSRSLLNMEIQPSSTPEYSGSYLTRVKAKINRLWLQTVRCWPSILPLVREFLQLALRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSSLSSVSSSINPTSFGANPSSSGRGLPILNEEGNLISVDGDSGNLVSDPSHSESNRGSGISKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPINHSTLVCLYHSDF 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1483265 1487831 - Cp4.1LG02g05860.1 Cpe02g00287 464236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00287 469 PANTHER PEROXISOME BIOGENESIS FACTOR 10 29 466 - -
Cpe02g00287 469 Pfam Pex2 / Pex12 amino terminal region 47 353 IPR006845 -
Cpe02g00287 469 ProSitePatterns Zinc finger RING-type signature. 430 439 IPR017907 -
Cpe02g00287 469 SUPERFAMILY RING/U-box 414 459 - -
Cpe02g00287 469 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 29 466 - -
Cpe02g00287 469 CDD RING-HC_PEX10 414 453 - -
Cpe02g00287 469 MobiDBLite consensus disorder prediction 1 27 - -
Cpe02g00287 469 Pfam Zinc finger, C3HC4 type (RING finger) 413 458 - -
Cpe02g00287 469 ProSiteProfiles Zinc finger RING-type profile. 415 453 IPR001841 -
Cpe02g00287 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 465 IPR013083 -
Cpe02g00287 469 SMART ring_2 415 452 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00287 Cpe06g00394 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00287 Cpe-Chr2:1483265 Cpe11g00182 Cpe-Chr11:984557 2.15E-10 dispersed
Cpe19g00942 Cpe-Chr19:6737126 Cpe02g00287 Cpe-Chr2:1483265 4.62E-06 dispersed
Cpe02g00287 Cpe-Chr2:1483265 Cpe06g00256 Cpe-Chr6:1366166 4.43E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00287 K13346 - csv:101214158 606.29