Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00305 ATGGAATCGGAGGATTCATTGATATCAAGATTGGAGGAACTGCAAAAAGACTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTACCCTACTGCTTCTCCTTCTTTACGCAAATCGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGGCTAACATAGCTCACGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGTACTTCAAATGGAGGCTATCTTTTCGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAGTGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAATTCCGAGAATACTACTGATTTCCTTCAAGCGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCTGCAAGTAAAGAAGTCGTCGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGATGAACATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGACGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAGGGAGCTGCAAATGCTGTTCGTGGCGGCGAGTATATGTATATTTGA 909 45.87 MESEDSLISRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQRTSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDNNNNSENTTDFLQAFMDLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1592127 1595041 - Cp4.1LG02g05650.1 Cpe02g00305 464254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00305 302 Pfam Ring finger domain 221 263 IPR001841 -
Cpe02g00305 302 SMART ring_2 222 262 IPR001841 -
Cpe02g00305 302 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Cpe02g00305 302 Coils Coil 1 21 - -
Cpe02g00305 302 PANTHER ABI3-INTERACTING PROTEIN 2-1 8 296 - -
Cpe02g00305 302 Coils Coil 273 293 - -
Cpe02g00305 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 269 IPR013083 -
Cpe02g00305 302 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 8 296 - -
Cpe02g00305 302 SUPERFAMILY RING/U-box 203 269 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00305 Cpe-Chr2:1592127 Cpe20g00175 Cpe-Chr20:1001030 2.16E-25 dispersed
Cpe02g00305 Cpe-Chr2:1592127 Cpe09g01094 Cpe-Chr9:9462056 3.60E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00305 K16274 - zju:107420142 419.083