Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00305 | ATGGAATCGGAGGATTCATTGATATCAAGATTGGAGGAACTGCAAAAAGACTTGAGGAAGAAACAGAGATTCGAGGAAGCAGTTTCCACCACTATATCTCTTCTTCAAGATTGCTACCCTACTGCTTCTCCTTCTTTACGCAAATCGTTCTATTCCGTAATTTGCCGAGTTGCTACAGTATTGAAGACAAGATATACGGCCCCAGGGTTTTGGTGTTCTGGTCTCAAGCTTTTTGAGGTTTCTTTGAGTCTGGTCTCTGATCCTTCTGAGAAACAACAATTACAGGCTAACATAGCTCACGCCAAGGAAATTCTGCACCAAATTGACAATCCATCTTCACCGTCACAACGTACTTCAAATGGAGGCTATCTTTTCGAGGGCCATCTCACTGTTGATCCGGAGCCACCCCAGCCCCAGTGGCTGGTGCAATCGAACCTCTTGACAGCCGCTGCAGCTACGCTATTTAACGCTGAATCTTCTCAAGCTCCGGTTGACAACAACAACAATTCCGAGAATACTACTGATTTCCTTCAAGCGTTCATGGATTTGGAAACGGTTAGCGGACCTCCGAAAGTTCCTCCTGCAAGTAAAGAAGTCGTCGAGAAACTTCCTGTAATTACTATAACAGAGGAAGTTCTTGCCAAGCTAGGAAGAGATGTACAATGTGCCATTTGCAGGGAAAACTTGGCTGTTGATGACAAGATGCAGGAATTGCCTTGCAAGCACACATTCCACCCACCTTGTTTGAAGCCATGGCTGGATGAACATAACTCTTGCCCGATCTGTCGACACGAATTGCCCACCGACGACCATAAATATGAGAGCTGGAAGGAGCGAGAGAAGGAGGCAGAAGAAGAGAGAAAGGGAGCTGCAAATGCTGTTCGTGGCGGCGAGTATATGTATATTTGA | 909 | 45.87 | MESEDSLISRLEELQKDLRKKQRFEEAVSTTISLLQDCYPTASPSLRKSFYSVICRVATVLKTRYTAPGFWCSGLKLFEVSLSLVSDPSEKQQLQANIAHAKEILHQIDNPSSPSQRTSNGGYLFEGHLTVDPEPPQPQWLVQSNLLTAAAATLFNAESSQAPVDNNNNSENTTDFLQAFMDLETVSGPPKVPPASKEVVEKLPVITITEEVLAKLGRDVQCAICRENLAVDDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDHKYESWKEREKEAEEERKGAANAVRGGEYMYI | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1592127 | 1595041 | - | Cp4.1LG02g05650.1 | Cpe02g00305 | 464254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00305 | 302 | Pfam | Ring finger domain | 221 | 263 | IPR001841 | - | |
Cpe02g00305 | 302 | SMART | ring_2 | 222 | 262 | IPR001841 | - | |
Cpe02g00305 | 302 | ProSiteProfiles | Zinc finger RING-type profile. | 222 | 263 | IPR001841 | - | |
Cpe02g00305 | 302 | Coils | Coil | 1 | 21 | - | - | |
Cpe02g00305 | 302 | PANTHER | ABI3-INTERACTING PROTEIN 2-1 | 8 | 296 | - | - | |
Cpe02g00305 | 302 | Coils | Coil | 273 | 293 | - | - | |
Cpe02g00305 | 302 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 184 | 269 | IPR013083 | - | |
Cpe02g00305 | 302 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 8 | 296 | - | - | |
Cpe02g00305 | 302 | SUPERFAMILY | RING/U-box | 203 | 269 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00305 | Cpe-Chr2:1592127 | Cpe20g00175 | Cpe-Chr20:1001030 | 2.16E-25 | dispersed | |
Cpe02g00305 | Cpe-Chr2:1592127 | Cpe09g01094 | Cpe-Chr9:9462056 | 3.60E-26 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00305 | K16274 | - | zju:107420142 | 419.083 |