Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00310 ATGGGCTATCTGAATTCAGTCTTGTCTTGTTCGAGCCAGATTCATGCTGCTGAGGAGGCTCCTGTAAGCGGCGGGGGACTAAGTCAGAATGGAAAGTTCAGCTACGGATATGCTAGCTCTCCGGGGAAGAGATCTTCGATGGAAGATTTTTATGAGACACGTATAGATGGCGTGGACGGAGAAATAGTTGGTCTATTTGGTGTGTTTGACGGTCATGGGGGAGCACGAGCTGCAGAGTATGTGAAGCACAATCTTTTTAGTAATTTAATCAGCCATCCAAAGTTCATATCGGATACCAAATCTGCCATAGCTGATGCCTACAACCATACAGACACAGAATTTCTGAAGTCTGAAAATAATCAAAACAGAGATGCTGGATCAACCGCATCCACTGCCATTCTAGTTGGTGATCGCTTACTTGTTGCAAATGTCGGTGATTCTAGAGCTGTTATTTGCCGGGGTGGCACTGCCATTGCTGTCTCTCGAGATCATAAGCCTGACCAAACTGATGAGCGACGACGAATTGAGGATGCAGGAGGATTTGTGATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCACGTGCATTTGGTGATAGGTTGTTAAAGCAATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAAAGATTGATAGCTCGCTCGAGTTTCTTATACTTGCTAGTGATGGGCTATGGGATGTCGTCACTAACGAGGAAGCTGTTGCTATGACCAAACCAATTCCGGACCCAGAAGAGGCGGCTAAGAGGTTGATGCAAGAAGCATATCAAAGAGGTAGCGCTGATAACATTACTTGCGTCGTCGTCCGTTTCTTGGCAAATCAGGGAAGCCCCTCTCTTCCAACTTCTGGTACGGTGTCTGAGTTGCTGCCTACATAG 906 46.58 MGYLNSVLSCSSQIHAAEEAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKHNLFSNLISHPKFISDTKSAIADAYNHTDTEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMTKPIPDPEEAAKRLMQEAYQRGSADNITCVVVRFLANQGSPSLPTSGTVSELLPT 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1640017 1644169 - Cp4.1LG02g05500.1 Cpe02g00310 464259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00310 301 PANTHER ALPHABET, ISOFORM E-RELATED 3 287 - -
Cpe02g00310 301 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Cpe02g00310 301 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Cpe02g00310 301 SMART PP2C_SIG_2 45 280 IPR001932 -
Cpe02g00310 301 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Cpe02g00310 301 CDD PP2Cc 33 280 IPR001932 -
Cpe02g00310 301 Gene3D - 26 284 IPR036457 -
Cpe02g00310 301 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Cpe02g00310 301 SMART PP2C_4 24 278 IPR001932 -
Cpe02g00310 301 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 287 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00310 Cpe06g00276 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00310 Cpe-Chr2:1640017 Cpe09g00038 Cpe-Chr9:231284 1.50E-121 dispersed
Cpe12g00212 Cpe-Chr12:1384868 Cpe02g00310 Cpe-Chr2:1640017 1.01E-20 dispersed
Cpe14g00030 Cpe-Chr14:165788 Cpe02g00310 Cpe-Chr2:1640017 1.67E-32 dispersed
Cpe17g00135 Cpe-Chr17:841158 Cpe02g00310 Cpe-Chr2:1640017 1.35E-13 dispersed
Cpe18g00033 Cpe-Chr18:574342 Cpe02g00310 Cpe-Chr2:1640017 2.77E-28 dispersed
Cpe02g00310 Cpe-Chr2:1640017 Cpe02g00317 Cpe-Chr2:1677448 1.72E-30 proximal
Cpe08g01339 Cpe-Chr8:9653010 Cpe02g00310 Cpe-Chr2:1640017 2.58E-47 transposed
Cpe02g00310 Cpe-Chr2:1640017 Cpe06g00276 Cpe-Chr6:1521860 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00310 K17506 - csv:101216117 569.311