Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00316 ATGCAGGAAGATAAGTCGGTGATAAGTTTGAGACCAGGTGGTGGCGGTGGCGTTCGTGGAAGCAGATTTGCTACTACTCGCTTCGATTCATCCTCTGCCGATTCTTCGTCGCTTCGTCCTCATGGCGGCGTTACGTTAACCCTTAAGACTGGAGATCTACGGTTTGAAGGTCGTGAGCGAATCCAGTACACTCGAGACCAGATTCTGCAGCTTAGAGAGGTTGCAACAGTCCCTGAGGATATCTTGAAGGTCAAATTAGAAGTCGAGACAGAGATTTTTGGGGAGGATCAAACATGGGCTCGTGCTGAAAACATTCAGCAATCGCAATCTCAAGGTCGTTACTTTGAGCCAGACAATCGAGATTGGCGTGGTCGATCTGGGCAGTTACCTGCCTCTGCAGAGGAAGGATCTTGGGATGCAATTCGTGAGGATAAGGATTTATCAGGTCAATCTCAGTCGAGGTTGCATGACTCTAATAATAGGAGTCAAGCTTCTGGTAACCAAGGGGTTGGTACTGCACCTGCTCTCATCAAGGCCGACGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGAACGTGTTTTGAAGACAGTGAAAGGTATACTTAATAAGTTGACTCCAGAAAAGTTCGACGTACTGATGGGTCAACTGATTGACTCTGGAATTGTGTCCGCTGATATTTTGAAGGACGTTATATCACTTTTATTTGAGAAGGCCGTGTTTGAGCCCACATTTTGCCCTATGTATGCACTTTTGTGCTCTGACCTTAATGACAAGCTTCCTCCATTCCCATCTGATGTTCCTGGAGAGAAAGATATCACTTTTAAACGTGTTCTTTTAAACATTTGCCAAGAGGCATTTGAAGGTGCTGAGCACATAAGGGCAGAAATCGGGCGGCTGACTGATCCTGAGCATGAAATGGAAAGAAGAGATAAGGAAAGAATGGTTAAGCTTCGAACTCTTGGAAACATTCGCCTGATAGGTGAGCTTCTTAAACAGAAGATGGTGACTGAAAGGATTGTTCACCATATTGTTCTGGAGCTGTTGGGGTCCGACAATAACATATGCCCTGCTGAGGAGAATGTCGAGGCTATTTGTCAGTTTTTTAACACAATTGGCAAGCAGATGGATGAAAGCCCAAAATCTCGGCGGGTCAATGATGTATATTTCAGCCGGTTGAAGGAGCTCGCTGCAAACACTCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAATAATTGGGTTCCTAGGCGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCAGAGGCTGAGAAGAATCTAGGGCTTCGTCCCGGTTCAATGGCAATGATGAGAAATGGCCGTAATGCAGAGGCACTTGGGGGACTAAGTCCTGCTGGATTTCCTGTTGCTCGTCCTGGCTTTGGAGGTATGATGCCTGGAATGCCTCCTGGAACGAGGAAAATGCCTGGACTTGATTCGGACGATTGGGAGGTGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAGCGTGCCCAGACGCCATTAATTGGCAAAACACCTTCCATTAATTCAAAATATCTACCTCAGGGAAGTGGTGGTGTAATAACTGGGAAAACAAGCGCCTTGCTACAGGGCAGTGCTGCATCTCCTGCACGAACAAGTCCCACGCCTGGAATCCAACCCGTCGCTCACAACGCTAGACCAGTTCCTCCAGTTGCATCCACCATATCCTCTCCTCAGAAGCAAACAGCTCCTGCTGTTGTATCCAATTCTGCTGATCTTCACAAAAAAACCGTTTCACTGCTCGAGGAATACTTTAGTGTACGGATTCTCGATGAAGCGCTACTGTGTGTTGAGGAGCTAAAATCTCCAGCATATCACCCCGAGGTTGTTAAAGAATCTCTTACCATAGCACTTGAAAAGATTCCACCATGTGTAGACCCAGTTGTTAAGCTTCTTGACCACCTGCTTCACAAGAATGTCTTCACTGCAAAGGATATCGGTACCGGGTGCCTTCTTTACGGGTCCATGATGGATGATATAGGCATCGATTATCCGAACGTGCCAAACTTTTTCGGTGATACCCTCGGGAAGTTAATATTGATCGGGGGTTTGGATTTTTCAGTCGTGAAGGAGATCCTGGAGAAGCTCGAAGATAACTATTTCCAGAAGTCCATTTTTGGTAGTGTTATGAAGATCCTCAACTCGAGCCCTTCTGGAGAAGGAATTCTGGCAACTCAAAGTGTTGAAATCCAAGCATGTGAGAATTTACTTGCGTGA 2298 46.21 MQEDKSVISLRPGGGGGVRGSRFATTRFDSSSADSSSLRPHGGVTLTLKTGDLRFEGRERIQYTRDQILQLREVATVPEDILKVKLEVETEIFGEDQTWARAENIQQSQSQGRYFEPDNRDWRGRSGQLPASAEEGSWDAIREDKDLSGQSQSRLHDSNNRSQASGNQGVGTAPALIKADVPWSVRRGNISEKERVLKTVKGILNKLTPEKFDVLMGQLIDSGIVSADILKDVISLLFEKAVFEPTFCPMYALLCSDLNDKLPPFPSDVPGEKDITFKRVLLNICQEAFEGAEHIRAEIGRLTDPEHEMERRDKERMVKLRTLGNIRLIGELLKQKMVTERIVHHIVLELLGSDNNICPAEENVEAICQFFNTIGKQMDESPKSRRVNDVYFSRLKELAANTQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGSMAMMRNGRNAEALGGLSPAGFPVARPGFGGMMPGMPPGTRKMPGLDSDDWEVVPRSRSMPRGERAQTPLIGKTPSINSKYLPQGSGGVITGKTSALLQGSAASPARTSPTPGIQPVAHNARPVPPVASTISSPQKQTAPAVVSNSADLHKKTVSLLEEYFSVRILDEALLCVEELKSPAYHPEVVKESLTIALEKIPPCVDPVVKLLDHLLHKNVFTAKDIGTGCLLYGSMMDDIGIDYPNVPNFFGDTLGKLILIGGLDFSVVKEILEKLEDNYFQKSIFGSVMKILNSSPSGEGILATQSVEIQACENLLA 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1669715 1675560 + Cp4.1LG02g05590.1 Cpe02g00316 464265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00316 765 MobiDBLite consensus disorder prediction 1 40 - -
Cpe02g00316 765 MobiDBLite consensus disorder prediction 24 40 - -
Cpe02g00316 765 MobiDBLite consensus disorder prediction 137 151 - -
Cpe02g00316 765 ProSiteProfiles MI domain profile. 599 721 IPR003891 -
Cpe02g00316 765 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 764 IPR045208 GO:0003743
Cpe02g00316 765 Gene3D - 188 423 - -
Cpe02g00316 765 Pfam MIF4G domain 197 422 IPR003890 GO:0003723|GO:0005515
Cpe02g00316 765 Gene3D - 595 754 - -
Cpe02g00316 765 MobiDBLite consensus disorder prediction 103 171 - -
Cpe02g00316 765 MobiDBLite consensus disorder prediction 508 529 - -
Cpe02g00316 765 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 764 - -
Cpe02g00316 765 SUPERFAMILY ARM repeat 190 425 IPR016024 -
Cpe02g00316 765 SMART ma3_7 600 712 IPR003891 -
Cpe02g00316 765 SMART if4_15 197 422 IPR003890 GO:0003723|GO:0005515
Cpe02g00316 765 Pfam MA3 domain 601 711 IPR003891 -
Cpe02g00316 765 SUPERFAMILY ARM repeat 597 751 IPR016024 -
Cpe02g00316 765 MobiDBLite consensus disorder prediction 152 170 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00316 Cpe06g00288 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00316 Cpe-Chr2:1669715 Cpe08g00427 Cpe-Chr8:2724902 6.86E-67 dispersed
Cpe18g00574 Cpe-Chr18:6203733 Cpe02g00316 Cpe-Chr2:1669715 0 wgd
Cpe02g00316 Cpe-Chr2:1669715 Cpe04g01260 Cpe-Chr4:10480316 0 wgd
Cpe02g00316 Cpe-Chr2:1669715 Cpe06g00288 Cpe-Chr6:1578984 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00316 K03260 - csv:101211356 1190.25