Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00317 | ATGGCTCGCCACCATAGCCAAGTCATTTGTACTATTGGAACCGTGTGCTACAGTGAATCGAGTGCTTTTTCATGGTGGATTTCTAGTTGTTGGCTGGCCATGGCTATGAGAAGGAATGAGAAAAAGATCGAAATGGGCATTTACCTCAGCAATCCAAAAACTGAGAAGACCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGGTAAGGTGGTTGCGAAGTTCTGTGCTAAGTACCTACATCAGCAAGTGAAGAAAAATGAAGCTTATGCAGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATACTTGAGAATGGATGAAATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTGGGTGACAGATTGAACAAGTTCACTGGCATGATAGAGGGGTTAATCTGGTCACCAAAAAGCAGTGACGCAAATGACCAGGCTGATGATTGGGCTTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTTATTGTTGCAAATGCTGGTGATTCACGTTGCGTGATATCAAGGAAGGGCCAGGCTCACAGCCTCTCTAGGGATCACAAGCCTGATCTTGAGATTGAGAGGGATAGAATTCTTAAAGCTGGTGGTTTTATACATGCTGGACGGGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGATATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATTATCACTGCAAATCCTGATGTAACCACTGTTGAGCTTTGCGACGATGATGAGTTTATTGTGATAGCCTGTGATGGGATATGGGATTGCATGTCTAACCAGCAGCTAGTAGATTTTATACATGAACAGCTACAATCAGAAAGTAAACTCTCTGTGGTTGTAGAGAGAGTACTCGATAATTGTTTGGCACCTTCCACAGCTGGTGGCGAGGGATGTGATAACATGACCATGATTTTGGTGCAGCTTAAGAAAGATATCCAATCAAACTCCTCTGTCGACGAGCAAACTTCACCCGCTACCGCTACCGCTACCGCTACCGCTACCGCCACCACCAAACCAGATAGTACCAAATCGAAGGAAGGAGATGAATCGAACTAG | 1251 | 44.28 | MARHHSQVICTIGTVCYSESSAFSWWISSCWLAMAMRRNEKKIEMGIYLSNPKTEKTSEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNEAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAILGDRLNKFTGMIEGLIWSPKSSDANDQADDWAFEEGPHSDFSGPTSGCTACVAIIRNNKLIVANAGDSRCVISRKGQAHSLSRDHKPDLEIERDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLQSESKLSVVVERVLDNCLAPSTAGGEGCDNMTMILVQLKKDIQSNSSVDEQTSPATATATATATATTKPDSTKSKEGDESN | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1677448 | 1685907 | + | Cp4.1LG02g05640.1 | Cpe02g00317 | 464266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00317 | 416 | ProSiteProfiles | PPM-type phosphatase domain profile. | 67 | 373 | IPR001932 | - | |
Cpe02g00317 | 416 | ProSitePatterns | PPM-type phosphatase domain signature. | 96 | 104 | IPR000222 | GO:0043169 | |
Cpe02g00317 | 416 | PANTHER | PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED | 42 | 386 | - | - | |
Cpe02g00317 | 416 | SMART | PP2C_4 | 57 | 371 | IPR001932 | - | |
Cpe02g00317 | 416 | CDD | PP2Cc | 67 | 373 | IPR001932 | - | |
Cpe02g00317 | 416 | PANTHER | PROTEIN PHOSPHATASE 2C | 42 | 386 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe02g00317 | 416 | Gene3D | - | 44 | 374 | IPR036457 | - | |
Cpe02g00317 | 416 | MobiDBLite | consensus disorder prediction | 380 | 405 | - | - | |
Cpe02g00317 | 416 | Pfam | Protein phosphatase 2C | 179 | 357 | IPR001932 | - | |
Cpe02g00317 | 416 | Pfam | Protein phosphatase 2C | 67 | 147 | IPR001932 | - | |
Cpe02g00317 | 416 | MobiDBLite | consensus disorder prediction | 380 | 416 | - | - | |
Cpe02g00317 | 416 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 30 | - | - | |
Cpe02g00317 | 416 | SUPERFAMILY | PP2C-like | 47 | 374 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00317 | Cpe-Chr2:1677448 | Cpe17g00635 | Cpe-Chr17:5186043 | 0 | dispersed | |
Cpe09g00023 | Cpe-Chr9:134197 | Cpe02g00317 | Cpe-Chr2:1677448 | 5.37E-28 | dispersed | |
Cpe02g00310 | Cpe-Chr2:1640017 | Cpe02g00317 | Cpe-Chr2:1677448 | 1.72E-30 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00317 | K17499 | - | csv:101211604 | 657.136 |