Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00317 ATGGCTCGCCACCATAGCCAAGTCATTTGTACTATTGGAACCGTGTGCTACAGTGAATCGAGTGCTTTTTCATGGTGGATTTCTAGTTGTTGGCTGGCCATGGCTATGAGAAGGAATGAGAAAAAGATCGAAATGGGCATTTACCTCAGCAATCCAAAAACTGAGAAGACCTCTGAAGATGGTGAAAATAGTCGTCTTAGATTTGGACTATCGTCCATGCAAGGATGGCGTGCCACAATGGAAGATGCTCATGCTGCAATTCCTGATCTGGATGCTTGCACTTCCTTCTTTGGCGTTTATGATGGCCATGGAGGTAAGGTGGTTGCGAAGTTCTGTGCTAAGTACCTACATCAGCAAGTGAAGAAAAATGAAGCTTATGCAGCTGGAGATATAGGAACTTCTGTGCAGAAAGCATACTTGAGAATGGATGAAATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTGGGTGACAGATTGAACAAGTTCACTGGCATGATAGAGGGGTTAATCTGGTCACCAAAAAGCAGTGACGCAAATGACCAGGCTGATGATTGGGCTTTTGAGGAGGGTCCGCACTCTGATTTTTCTGGCCCAACTTCGGGGTGTACAGCTTGTGTTGCAATTATTAGAAATAACAAACTTATTGTTGCAAATGCTGGTGATTCACGTTGCGTGATATCAAGGAAGGGCCAGGCTCACAGCCTCTCTAGGGATCACAAGCCTGATCTTGAGATTGAGAGGGATAGAATTCTTAAAGCTGGTGGTTTTATACATGCTGGACGGGTCAATGGTAGCTTGAACCTTGCCAGAGCTATTGGTGATATGGAATTTAAGCAGAATAAATTTTTACCTGCTGAAAAGCAAATTATCACTGCAAATCCTGATGTAACCACTGTTGAGCTTTGCGACGATGATGAGTTTATTGTGATAGCCTGTGATGGGATATGGGATTGCATGTCTAACCAGCAGCTAGTAGATTTTATACATGAACAGCTACAATCAGAAAGTAAACTCTCTGTGGTTGTAGAGAGAGTACTCGATAATTGTTTGGCACCTTCCACAGCTGGTGGCGAGGGATGTGATAACATGACCATGATTTTGGTGCAGCTTAAGAAAGATATCCAATCAAACTCCTCTGTCGACGAGCAAACTTCACCCGCTACCGCTACCGCTACCGCTACCGCTACCGCCACCACCAAACCAGATAGTACCAAATCGAAGGAAGGAGATGAATCGAACTAG 1251 44.28 MARHHSQVICTIGTVCYSESSAFSWWISSCWLAMAMRRNEKKIEMGIYLSNPKTEKTSEDGENSRLRFGLSSMQGWRATMEDAHAAIPDLDACTSFFGVYDGHGGKVVAKFCAKYLHQQVKKNEAYAAGDIGTSVQKAYLRMDEMMRGQRGWRELAILGDRLNKFTGMIEGLIWSPKSSDANDQADDWAFEEGPHSDFSGPTSGCTACVAIIRNNKLIVANAGDSRCVISRKGQAHSLSRDHKPDLEIERDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIITANPDVTTVELCDDDEFIVIACDGIWDCMSNQQLVDFIHEQLQSESKLSVVVERVLDNCLAPSTAGGEGCDNMTMILVQLKKDIQSNSSVDEQTSPATATATATATATTKPDSTKSKEGDESN 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1677448 1685907 + Cp4.1LG02g05640.1 Cpe02g00317 464266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00317 416 ProSiteProfiles PPM-type phosphatase domain profile. 67 373 IPR001932 -
Cpe02g00317 416 ProSitePatterns PPM-type phosphatase domain signature. 96 104 IPR000222 GO:0043169
Cpe02g00317 416 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 42 386 - -
Cpe02g00317 416 SMART PP2C_4 57 371 IPR001932 -
Cpe02g00317 416 CDD PP2Cc 67 373 IPR001932 -
Cpe02g00317 416 PANTHER PROTEIN PHOSPHATASE 2C 42 386 IPR015655 GO:0004722|GO:0006470
Cpe02g00317 416 Gene3D - 44 374 IPR036457 -
Cpe02g00317 416 MobiDBLite consensus disorder prediction 380 405 - -
Cpe02g00317 416 Pfam Protein phosphatase 2C 179 357 IPR001932 -
Cpe02g00317 416 Pfam Protein phosphatase 2C 67 147 IPR001932 -
Cpe02g00317 416 MobiDBLite consensus disorder prediction 380 416 - -
Cpe02g00317 416 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Cpe02g00317 416 SUPERFAMILY PP2C-like 47 374 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00317 Cpe-Chr2:1677448 Cpe17g00635 Cpe-Chr17:5186043 0 dispersed
Cpe09g00023 Cpe-Chr9:134197 Cpe02g00317 Cpe-Chr2:1677448 5.37E-28 dispersed
Cpe02g00310 Cpe-Chr2:1640017 Cpe02g00317 Cpe-Chr2:1677448 1.72E-30 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00317 K17499 - csv:101211604 657.136