Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00336 | ATGACGGTTGAGCCAAGAGTTGATGACCCAAAGGACCAATTTCCGGTTGGAATGCGTGTTCTCGCCGTCGACGACGACCCCACTTGTCTTTTGATCTTGGAGACTTTGCTTCGCCGGTGCCACTATCATGTCACTACGACGAATCAGGCTATTATGGCACTCAAGTTATTGAGAGAAAACAAGAACAAGTTTGATGTGGTTATCAGTGATGTCCACATGCCTGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGGCTGGAGATGGACCTTCCTGTTATTATGCTGTCTGCAAATGGAGATCCCAAACTTGTGATGAAAGGGATAACTCATGGAGCATGTGATTACTTGCTGAAGCCTGTTCGCATTGAGGAGCTCAAGAACATTTGGCAGCATGTTATGAGGAGAAAGAAATTTGATCCAAAGGATCAGATGAATTCTATCAATCAGGCCAAGCATGATTATGAGAATGAGGCAGTGCGCAAAAGGATTTTGGACTTGATGAACGTTGAAAAGCTCACAAGAGAAAACGTTGCTAGTCATCTTCAGAAATATAGGCTTTATCTCAGGAGAATCAGCTGTGTAGCAAACCAACAAGCTAACATGGTGACTGCATTGAGCAGCGCCGACCCTTCGTATATGAGAATTGGTTCTCTTAACGGTATCGGGAATTTCCATTCCGTCACAGGACCTCCACCGTTTCCCAACACTGCTTATAGATCTATCCCGACCACCGGGATGCTCGGTCGATTGAATACTCCTGCTTGTATGGGCATGAATGGCCTTTCTTCCCCGGGAACCGTTCCATTGGAGTCTACATTTCAGCCAAGAACCCGCAGTGCGAATATGTTCCAGGGAATGCCAGAGTCATCAGGACTTGATCAAGTACAACACGTTAAGCACGGCACCCATGTGGACGATCTCGCTCGTGCTTTTGATCAGAGAACAGTGTTTTCTGCTGCTGGTCATTTGAGTAATGACCCCTTGATTTCAGTAGTATCTGCAAGCTTGGAAAGTTCACGTCCTTCGGTAGATAGTATTCGATGCACGGGTGACGATTGGTCGAAGGCTGCTCGTTCATCTAGGATGCTCTTGCATATAGGAAATTGTGTTTCTGACATTGCTTCAATATCTACTCAATCCCATGATTCAAGAACAGATACTCAATGTCAAGCAGCCACGAATAGCAATCGATATGATCGAGTAATCACAAAGGTTCCTGTTCAAGATTGGAATGATCTAGAGGACGCCTATTACGACACGACCGTGGCCTGTAGCTCATCAAATTCATTCGTACCACTGAATGGTGCTGCAGAGACGTTACCAAAGCGTTTCGAAAATCAGAACACAATCTTCTCTAGAAGCAAGGATTTTAACGTGCCTAGTCGAGCAAATGATCTCGATCGTGCAATGGTGGATCACGATCAATTCAAGAAATCGTCTATCGAGACATCGATCATGTTGAAACAAGGAGTTTTGTATGATCATCAGCAAAAAATGCAAGCTAGATTTTGTTCAAGTAACTGTGGTTCCTTGGAAGACATAGCATGTGCAATGATGAAGCAGGAACAAGATGGTGCAAAATTATTGGAAGGAGATTTTGGATGTGATAATTTTCCTATTGGAACGTGCACGTGCTTGTGA | 1644 | 44.46 | MTVEPRVDDPKDQFPVGMRVLAVDDDPTCLLILETLLRRCHYHVTTTNQAIMALKLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVMRRKKFDPKDQMNSINQAKHDYENEAVRKRILDLMNVEKLTRENVASHLQKYRLYLRRISCVANQQANMVTALSSADPSYMRIGSLNGIGNFHSVTGPPPFPNTAYRSIPTTGMLGRLNTPACMGMNGLSSPGTVPLESTFQPRTRSANMFQGMPESSGLDQVQHVKHGTHVDDLARAFDQRTVFSAAGHLSNDPLISVVSASLESSRPSVDSIRCTGDDWSKAARSSRMLLHIGNCVSDIASISTQSHDSRTDTQCQAATNSNRYDRVITKVPVQDWNDLEDAYYDTTVACSSSNSFVPLNGAAETLPKRFENQNTIFSRSKDFNVPSRANDLDRAMVDHDQFKKSSIETSIMLKQGVLYDHQQKMQARFCSSNCGSLEDIACAMMKQEQDGAKLLEGDFGCDNFPIGTCTCL | 547 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1805259 | 1813673 | - | Cp4.1LG02g05360.1 | Cpe02g00336 | 464285 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00336 | 547 | SUPERFAMILY | CheY-like | 17 | 151 | IPR011006 | - | |
Cpe02g00336 | 547 | SUPERFAMILY | Homeodomain-like | 155 | 191 | IPR009057 | - | |
Cpe02g00336 | 547 | Pfam | Response regulator receiver domain | 20 | 128 | IPR001789 | GO:0000160 | |
Cpe02g00336 | 547 | ProSiteProfiles | Response regulatory domain profile. | 19 | 134 | IPR001789 | GO:0000160 | |
Cpe02g00336 | 547 | Gene3D | - | 135 | 193 | - | - | |
Cpe02g00336 | 547 | Gene3D | - | 16 | 134 | - | - | |
Cpe02g00336 | 547 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 154 | 187 | IPR006447 | GO:0003677 | |
Cpe02g00336 | 547 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 1 | 151 | - | - | |
Cpe02g00336 | 547 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR10 | 158 | 520 | - | - | |
Cpe02g00336 | 547 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 158 | 520 | IPR045279 | GO:0009736 | |
Cpe02g00336 | 547 | PIRSF | RR_ARR_type-B | 156 | 545 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Cpe02g00336 | 547 | PIRSF | RR_ARR_type-B | 1 | 159 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Cpe02g00336 | 547 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 151 | IPR045279 | GO:0009736 | |
Cpe02g00336 | 547 | CDD | REC_typeB_ARR-like | 20 | 133 | - | - | |
Cpe02g00336 | 547 | SMART | REC_2 | 18 | 130 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00336 | Cpe-Chr2:1805259 | Cpe17g00047 | Cpe-Chr17:301283 | 1.23E-69 | dispersed | |
Cpe18g00551 | Cpe-Chr18:6077369 | Cpe02g00336 | Cpe-Chr2:1805259 | 1.95E-14 | wgd | |
Cpe02g00336 | Cpe-Chr2:1805259 | Cpe04g01239 | Cpe-Chr4:10362146 | 6.85E-34 | wgd | |
Cpe02g00336 | Cpe-Chr2:1805259 | Cpe06g00305 | Cpe-Chr6:1686684 | 1.63E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48997 | PF00072 | Response_reg | 7.70E-23 | CL0304 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00336 | - | K14491 | cpep:111788137 | 791.186 |