Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00371 ATGGCAAAATTCAATTGCTTCTCCGTTCGATCAGGGAAGAAGAAGAAAGCCAAGGATGGTTTAGAATCGCAAATGCCTGCTGAATTGAATAGTTTGACGAAGACCTTGCAAGTCAGTATCCATCACACTGAGGAATCTTTTCAAGATGGAGAAGCGAAGTCATCGACCATGGACGTTGCAATTCTGTACCCATCTGAGAATAATTCTAAGCTGGATGTTAAGGAAACGAACAATGAGAATCCTGTAGGAGGAGGAGGAGCAGTAGAAGCTGCATATGAAGGGGAAGATGAGCGTGACGACAACTCCATCAAGAGGAACCTTTCTGACTTTGATCTCGCTGCTCAAGACACCTGTGGAGAAGAATTCGAGTTTCGATTTTCTACTTCGTTGGAAAAACAATTTGATAATACCGTCGTTGAAGGTGGAGAAGGGGCTGATGCGATCCAAACTGGACATGTTAGTGATCCTGGAATTGGTAAGGCAGTATGTTGGGCATCACCTAAACTTAAACGCTCCTGCTCTAATCTGGAAACCAGGGATGTGCTTAGAGATCTATCTCATCAGATGCCCCCTTCAAAATCTCAGTCTTTTGAGAAACTGCAAGAATTGGCTGACAAAATGTGGAACTATGTCGAACCGGGCAGTCCGGAATCTATTATGACCCATCGCAGTGCTGATAAAGTGATGTTGAAGAAGCGTTCTTCGAGCCAGATTCTGCCTTCCAGAAGTCGAAGGTTGTGGTGGAAGTTGTTCCTGTGGAGCCATAGAAACCTGCAAAAGCCGTGGACTACCAAGGCTGCTGCTCCTACTAGCTCTGCTTTCAACCAGCAAGGCGGGTATTGTTCGGATAATCTCGAGCCGAACAGAGCTGTGGGGAAAAGTATGATGGAATCGCCTGGATCATTTGCAGAGGAAACCTGGACCAATGACCCGAGTAACAGTAAAGTTGAGGATCAGAATCAGGAGAGCTTGTGTAATGGAGTCTCTGGCTTGTGGCCACAAAACCAGTGGGTTGCATTTTCAGCAGAATCATCTTCCCTAAGAAGAGTGGATGAGTGGGTAAAGGATCTTCAAATTGAGCCACGTCTTTCGATCGACTACATTAGAGATGACAACGATGAAGATACTTTCTCCCCGCCATGTCCCGAGAGAACTGCAAGTCACACAGCTCGACGTGGGGAACCCAATCTTACAGAAGAGATTTTGCACGCGAATAGCGTCATCCAATCTCTGAATTCTTCCTCGACCGTGGCTCACATCTCTGGTATTGGCTTAAAAGCCATACCCACAATCTCACACCTATCCGGTCTTAGATCTGTCAATTTGTCCGGCAACCTCATAGTTCACATCAACTCTGGATCACTGCCCAAGGGGCTGCACACTCTTAACTTGTCCAGGAACAAGATCAGCGCCATTGAAGGACTCAAAGAATTAACACGTCTTCGAATCCTCGACCTGAGTTACAATCGCATTTCTCGCATAGGACATGGGCTGTCAAATTGTGCGATTATCAAGGAACTTCATCTCGCTGGCAACAAGATTAGTGATGTCGAGGGACTACATCGACTCTTGAAGCTCACTGTACTCGACCTGAGCTTCAACAAGATTTCAACAACCAAAGCTCTGGGCCAACTTGTAGCCAACTATAACTCTCTTCAAGCTCTTAATCTGTTGGGAAATCCAATTCAAAGCAACATGAGTGATGAGCAGCTTCGCAAGGCCGTTATTGGCCTTCTTCCAAACCTTGTTTATCTAAACAAGCAGGCCATCAAAGCACAGAGAGCTCGAGAAGCAGCGACCGATAGCATTGCTAAAGCAGCACTAGGAGGGAACAGTAGTTGGAATTCTCGCAGAAGATCATCAAGGAAAACAAGCCAGATGATTGCATCGTCTTCTCTCAGTGGGCGGAGGAGCAGCACTGCAAGTGTTGCTGCACACAAAGGCAGGCACAGATCAAAAGCGCCAACCCCACGCCCTTCTTCTCTGGGGTTGGCTTCATCTCGTTAA 2007 46.59 MAKFNCFSVRSGKKKKAKDGLESQMPAELNSLTKTLQVSIHHTEESFQDGEAKSSTMDVAILYPSENNSKLDVKETNNENPVGGGGAVEAAYEGEDERDDNSIKRNLSDFDLAAQDTCGEEFEFRFSTSLEKQFDNTVVEGGEGADAIQTGHVSDPGIGKAVCWASPKLKRSCSNLETRDVLRDLSHQMPPSKSQSFEKLQELADKMWNYVEPGSPESIMTHRSADKVMLKKRSSSQILPSRSRRLWWKLFLWSHRNLQKPWTTKAAAPTSSAFNQQGGYCSDNLEPNRAVGKSMMESPGSFAEETWTNDPSNSKVEDQNQESLCNGVSGLWPQNQWVAFSAESSSLRRVDEWVKDLQIEPRLSIDYIRDDNDEDTFSPPCPERTASHTARRGEPNLTEEILHANSVIQSLNSSSTVAHISGIGLKAIPTISHLSGLRSVNLSGNLIVHINSGSLPKGLHTLNLSRNKISAIEGLKELTRLRILDLSYNRISRIGHGLSNCAIIKELHLAGNKISDVEGLHRLLKLTVLDLSFNKISTTKALGQLVANYNSLQALNLLGNPIQSNMSDEQLRKAVIGLLPNLVYLNKQAIKAQRAREAATDSIAKAALGGNSSWNSRRRSSRKTSQMIASSSLSGRRSSTASVAAHKGRHRSKAPTPRPSSLGLASSR 668
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 2042955 2046690 - Cp4.1LG02g04900.1 Cpe02g00371 464320
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00371 668 SMART LRR_sd22_2 456 477 - -
Cpe02g00371 668 SMART LRR_sd22_2 501 522 - -
Cpe02g00371 668 SMART LRR_sd22_2 478 500 - -
Cpe02g00371 668 SMART LRR_sd22_2 523 544 - -
Cpe02g00371 668 Pfam Leucine-rich repeat 438 542 - -
Cpe02g00371 668 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 3 654 - -
Cpe02g00371 668 ProSiteProfiles Leucine-rich repeat profile. 480 502 IPR001611 GO:0005515
Cpe02g00371 668 SMART LRR_typ_2 523 545 IPR003591 -
Cpe02g00371 668 SMART LRR_typ_2 434 457 IPR003591 -
Cpe02g00371 668 SMART LRR_typ_2 478 501 IPR003591 -
Cpe02g00371 668 Gene3D Ribonuclease Inhibitor 499 596 IPR032675 -
Cpe02g00371 668 ProSiteProfiles Leucine-rich repeat profile. 458 479 IPR001611 GO:0005515
Cpe02g00371 668 PANTHER NISCHARIN RELATED 3 654 - -
Cpe02g00371 668 MobiDBLite consensus disorder prediction 370 392 - -
Cpe02g00371 668 ProSiteProfiles Leucine-rich repeat profile. 525 546 IPR001611 GO:0005515
Cpe02g00371 668 SUPERFAMILY Outer arm dynein light chain 1 425 592 - -
Cpe02g00371 668 MobiDBLite consensus disorder prediction 610 641 - -
Cpe02g00371 668 Gene3D Ribonuclease Inhibitor 395 498 IPR032675 -
Cpe02g00371 668 MobiDBLite consensus disorder prediction 610 668 - -
Cpe02g00371 668 ProSiteProfiles Leucine-rich repeat profile. 503 524 IPR001611 GO:0005515
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe02g00371 Cpe06g00424 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00371 Cpe-Chr2:2042955 Cpe15g00773 Cpe-Chr15:7890721 1.25E-73 dispersed
Cpe04g01361 Cpe-Chr4:11083713 Cpe02g00371 Cpe-Chr2:2042955 2.49E-09 transposed
Cpe02g00371 Cpe-Chr2:2042955 Cpe06g00424 Cpe-Chr6:2422845 2.30E-177 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00371 - - csv:101212929 1043.88