Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00371 | ATGGCAAAATTCAATTGCTTCTCCGTTCGATCAGGGAAGAAGAAGAAAGCCAAGGATGGTTTAGAATCGCAAATGCCTGCTGAATTGAATAGTTTGACGAAGACCTTGCAAGTCAGTATCCATCACACTGAGGAATCTTTTCAAGATGGAGAAGCGAAGTCATCGACCATGGACGTTGCAATTCTGTACCCATCTGAGAATAATTCTAAGCTGGATGTTAAGGAAACGAACAATGAGAATCCTGTAGGAGGAGGAGGAGCAGTAGAAGCTGCATATGAAGGGGAAGATGAGCGTGACGACAACTCCATCAAGAGGAACCTTTCTGACTTTGATCTCGCTGCTCAAGACACCTGTGGAGAAGAATTCGAGTTTCGATTTTCTACTTCGTTGGAAAAACAATTTGATAATACCGTCGTTGAAGGTGGAGAAGGGGCTGATGCGATCCAAACTGGACATGTTAGTGATCCTGGAATTGGTAAGGCAGTATGTTGGGCATCACCTAAACTTAAACGCTCCTGCTCTAATCTGGAAACCAGGGATGTGCTTAGAGATCTATCTCATCAGATGCCCCCTTCAAAATCTCAGTCTTTTGAGAAACTGCAAGAATTGGCTGACAAAATGTGGAACTATGTCGAACCGGGCAGTCCGGAATCTATTATGACCCATCGCAGTGCTGATAAAGTGATGTTGAAGAAGCGTTCTTCGAGCCAGATTCTGCCTTCCAGAAGTCGAAGGTTGTGGTGGAAGTTGTTCCTGTGGAGCCATAGAAACCTGCAAAAGCCGTGGACTACCAAGGCTGCTGCTCCTACTAGCTCTGCTTTCAACCAGCAAGGCGGGTATTGTTCGGATAATCTCGAGCCGAACAGAGCTGTGGGGAAAAGTATGATGGAATCGCCTGGATCATTTGCAGAGGAAACCTGGACCAATGACCCGAGTAACAGTAAAGTTGAGGATCAGAATCAGGAGAGCTTGTGTAATGGAGTCTCTGGCTTGTGGCCACAAAACCAGTGGGTTGCATTTTCAGCAGAATCATCTTCCCTAAGAAGAGTGGATGAGTGGGTAAAGGATCTTCAAATTGAGCCACGTCTTTCGATCGACTACATTAGAGATGACAACGATGAAGATACTTTCTCCCCGCCATGTCCCGAGAGAACTGCAAGTCACACAGCTCGACGTGGGGAACCCAATCTTACAGAAGAGATTTTGCACGCGAATAGCGTCATCCAATCTCTGAATTCTTCCTCGACCGTGGCTCACATCTCTGGTATTGGCTTAAAAGCCATACCCACAATCTCACACCTATCCGGTCTTAGATCTGTCAATTTGTCCGGCAACCTCATAGTTCACATCAACTCTGGATCACTGCCCAAGGGGCTGCACACTCTTAACTTGTCCAGGAACAAGATCAGCGCCATTGAAGGACTCAAAGAATTAACACGTCTTCGAATCCTCGACCTGAGTTACAATCGCATTTCTCGCATAGGACATGGGCTGTCAAATTGTGCGATTATCAAGGAACTTCATCTCGCTGGCAACAAGATTAGTGATGTCGAGGGACTACATCGACTCTTGAAGCTCACTGTACTCGACCTGAGCTTCAACAAGATTTCAACAACCAAAGCTCTGGGCCAACTTGTAGCCAACTATAACTCTCTTCAAGCTCTTAATCTGTTGGGAAATCCAATTCAAAGCAACATGAGTGATGAGCAGCTTCGCAAGGCCGTTATTGGCCTTCTTCCAAACCTTGTTTATCTAAACAAGCAGGCCATCAAAGCACAGAGAGCTCGAGAAGCAGCGACCGATAGCATTGCTAAAGCAGCACTAGGAGGGAACAGTAGTTGGAATTCTCGCAGAAGATCATCAAGGAAAACAAGCCAGATGATTGCATCGTCTTCTCTCAGTGGGCGGAGGAGCAGCACTGCAAGTGTTGCTGCACACAAAGGCAGGCACAGATCAAAAGCGCCAACCCCACGCCCTTCTTCTCTGGGGTTGGCTTCATCTCGTTAA | 2007 | 46.59 | MAKFNCFSVRSGKKKKAKDGLESQMPAELNSLTKTLQVSIHHTEESFQDGEAKSSTMDVAILYPSENNSKLDVKETNNENPVGGGGAVEAAYEGEDERDDNSIKRNLSDFDLAAQDTCGEEFEFRFSTSLEKQFDNTVVEGGEGADAIQTGHVSDPGIGKAVCWASPKLKRSCSNLETRDVLRDLSHQMPPSKSQSFEKLQELADKMWNYVEPGSPESIMTHRSADKVMLKKRSSSQILPSRSRRLWWKLFLWSHRNLQKPWTTKAAAPTSSAFNQQGGYCSDNLEPNRAVGKSMMESPGSFAEETWTNDPSNSKVEDQNQESLCNGVSGLWPQNQWVAFSAESSSLRRVDEWVKDLQIEPRLSIDYIRDDNDEDTFSPPCPERTASHTARRGEPNLTEEILHANSVIQSLNSSSTVAHISGIGLKAIPTISHLSGLRSVNLSGNLIVHINSGSLPKGLHTLNLSRNKISAIEGLKELTRLRILDLSYNRISRIGHGLSNCAIIKELHLAGNKISDVEGLHRLLKLTVLDLSFNKISTTKALGQLVANYNSLQALNLLGNPIQSNMSDEQLRKAVIGLLPNLVYLNKQAIKAQRAREAATDSIAKAALGGNSSWNSRRRSSRKTSQMIASSSLSGRRSSTASVAAHKGRHRSKAPTPRPSSLGLASSR | 668 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2042955 | 2046690 | - | Cp4.1LG02g04900.1 | Cpe02g00371 | 464320 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00371 | 668 | SMART | LRR_sd22_2 | 456 | 477 | - | - | |
Cpe02g00371 | 668 | SMART | LRR_sd22_2 | 501 | 522 | - | - | |
Cpe02g00371 | 668 | SMART | LRR_sd22_2 | 478 | 500 | - | - | |
Cpe02g00371 | 668 | SMART | LRR_sd22_2 | 523 | 544 | - | - | |
Cpe02g00371 | 668 | Pfam | Leucine-rich repeat | 438 | 542 | - | - | |
Cpe02g00371 | 668 | PANTHER | OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN | 3 | 654 | - | - | |
Cpe02g00371 | 668 | ProSiteProfiles | Leucine-rich repeat profile. | 480 | 502 | IPR001611 | GO:0005515 | |
Cpe02g00371 | 668 | SMART | LRR_typ_2 | 523 | 545 | IPR003591 | - | |
Cpe02g00371 | 668 | SMART | LRR_typ_2 | 434 | 457 | IPR003591 | - | |
Cpe02g00371 | 668 | SMART | LRR_typ_2 | 478 | 501 | IPR003591 | - | |
Cpe02g00371 | 668 | Gene3D | Ribonuclease Inhibitor | 499 | 596 | IPR032675 | - | |
Cpe02g00371 | 668 | ProSiteProfiles | Leucine-rich repeat profile. | 458 | 479 | IPR001611 | GO:0005515 | |
Cpe02g00371 | 668 | PANTHER | NISCHARIN RELATED | 3 | 654 | - | - | |
Cpe02g00371 | 668 | MobiDBLite | consensus disorder prediction | 370 | 392 | - | - | |
Cpe02g00371 | 668 | ProSiteProfiles | Leucine-rich repeat profile. | 525 | 546 | IPR001611 | GO:0005515 | |
Cpe02g00371 | 668 | SUPERFAMILY | Outer arm dynein light chain 1 | 425 | 592 | - | - | |
Cpe02g00371 | 668 | MobiDBLite | consensus disorder prediction | 610 | 641 | - | - | |
Cpe02g00371 | 668 | Gene3D | Ribonuclease Inhibitor | 395 | 498 | IPR032675 | - | |
Cpe02g00371 | 668 | MobiDBLite | consensus disorder prediction | 610 | 668 | - | - | |
Cpe02g00371 | 668 | ProSiteProfiles | Leucine-rich repeat profile. | 503 | 524 | IPR001611 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe02g00371 | Cpe06g00424 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00371 | Cpe-Chr2:2042955 | Cpe15g00773 | Cpe-Chr15:7890721 | 1.25E-73 | dispersed | |
Cpe04g01361 | Cpe-Chr4:11083713 | Cpe02g00371 | Cpe-Chr2:2042955 | 2.49E-09 | transposed | |
Cpe02g00371 | Cpe-Chr2:2042955 | Cpe06g00424 | Cpe-Chr6:2422845 | 2.30E-177 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00371 | - | - | csv:101212929 | 1043.88 |