Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00373 ATGGTGCAGTCGGTGAATTCTGGAGGTGGATTTGATTGGAATTGGGGCTTTTGTGTTGGTTTGGTGGAGATGACTCTGCTCTGTTGTTTTAATGCTTCATACTCTCGGATTAGATCGGCGTTAAACTACGGTAAAGGACGAAGCCACGAGGGGCTTATCAAGTACGGGTTCTGCCTGGTAAAAGGGAAAGCTAATCATCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAACTGGGGCTCTTTGCCATTTACGATGGCCATTTAGGAGAAAATGTGCCTGCCTATTTACAAAAGCATTTGTTTTCTAATATCCTGAAGGAGGACGAGTTTTGGGTCGATCCCAACAGCTCCATCTCGAAAGCCTATGAGAAGACAGACCAGGCCATTCTATCCCACAGCTCCGACTTGGGTCGTGGTGGATCAACTGCGGTTAATGCTATTCTGATTAACGGTCAACGATTATGGGTGGCCAATGTTGGAGATTCTCGTGCAGTTCTATCAAGAGGGGGTGAAGCTATACAGATGAGCATCGACCATGAGCCGAGTACGGAGCGTGGCATAATTGAGCATAAAGGGGGTTTCGTTTCGAACATGCCAGGAGACGTACCTCGAGTGAATGGTCAGCTAGCAGTGTCACGAGCATTTGGAGACAAGAGCCTCAAATCTCACTTGCGATCGGATCCCGATATACGAGATATCAACATAGATGCCAACATGGACGTATTAATTCTCGCCAGCGACGGTCTATGGAAGGTTATGGCGAATCAAGAAGCGGTCGATATCGCTCGAAGAATCAAAGACCCATTAAAGGCTGCTAAGCAGTTGATAACTGAGGCTTTGCAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTGA 909 45.87 MVQSVNSGGGFDWNWGFCVGLVEMTLLCCFNASYSRIRSALNYGKGRSHEGLIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGENVPAYLQKHLFSNILKEDEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVNAILINGQRLWVANVGDSRAVLSRGGEAIQMSIDHEPSTERGIIEHKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDINIDANMDVLILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALQKESKDDISCIVVRFR 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2056433 2059549 - Cp4.1LG02g04930.1 Cpe02g00373 464322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00373 302 SMART PP2C_SIG_2 65 301 IPR001932 -
Cpe02g00373 302 PANTHER PROTEIN PHOSPHATASE 2C 33 301 IPR015655 GO:0004722|GO:0006470
Cpe02g00373 302 CDD PP2Cc 53 301 IPR001932 -
Cpe02g00373 302 ProSiteProfiles PPM-type phosphatase domain profile. 54 301 IPR001932 -
Cpe02g00373 302 SUPERFAMILY PP2C-like 49 301 IPR036457 -
Cpe02g00373 302 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 33 301 - -
Cpe02g00373 302 SMART PP2C_4 46 299 IPR001932 -
Cpe02g00373 302 Gene3D - 49 302 IPR036457 -
Cpe02g00373 302 Pfam Protein phosphatase 2C 63 294 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00373 Cpe-Chr2:2056433 Cpe14g00210 Cpe-Chr14:1175110 8.66E-149 dispersed
Cpe14g00052 Cpe-Chr14:290547 Cpe02g00373 Cpe-Chr2:2056433 4.62E-37 dispersed
Cpe02g00373 Cpe-Chr2:2056433 Cpe01g00354 Cpe-Chr1:2039516 3.34E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00373 K17506 - csv:101213414 526.554