Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe02g00389 | ATGGATTCAAAGAAGTCTAACAAAATCAGAGACATCGTTAGGCTTCAACAGATCCTGAAGAAGTGGCGGAAGTTGGCGAACTCATCAAAGACGGCGAATAGATACTCCGGCACGGCGGCGGGATCTGGCGGAAAGAGCATGAAGTTTCTGAAGCGGACGCTCTCAGCCGGATGCGATGTTTCCGGCGCGTCCGTACCGAAAGGATCTTTAGCGGTGAGCGTCGGTGAGGAGCAAAAGCGATTTGTGATTCCGACGCAGTACTTAGGGCATCCGGCGTTTGAGATTCTGTTGAGAGAGGCGGAGGAGGAGTTCGGATTTCAACAAACTGGAGTTCTGAGGCTTCCTTGTGAGGTAACGGTGTTTGAACATGTGGTGAGATTGGTGGAGAGGAAGGAGGGAGATTTGTTCGGCGGAGAGGAGGTTTTGAGTCTTTGTTCGTTGGAATCGCTGCTGCTTACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG | 495 | 52.32 | MDSKKSNKIRDIVRLQQILKKWRKLANSSKTANRYSGTAAGSGGKSMKFLKRTLSAGCDVSGASVPKGSLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFEHVVRLVERKEGDLFGGEEVLSLCSLESLLLTPSHRPQSPMCR | 164 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 2156077 | 2156571 | + | Cp4.1LG02g04830.1 | Cpe02g00389 | 464338 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe02g00389 | 164 | Pfam | Auxin responsive protein | 21 | 127 | IPR003676 | GO:0009733 | |
| Cpe02g00389 | 164 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 6 | 164 | IPR003676 | GO:0009733 | |
| Cpe02g00389 | 164 | PANTHER | SAUR FAMILY PROTEIN | 6 | 164 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe02g00389 | Cpe-Chr2:2156077 | Cpe05g01300 | Cpe-Chr5:9073617 | 6.10E-25 | dispersed | |
| Cpe15g00893 | Cpe-Chr15:8603631 | Cpe02g00389 | Cpe-Chr2:2156077 | 5.95E-20 | dispersed | |
| Cpe16g00283 | Cpe-Chr16:4814742 | Cpe02g00389 | Cpe-Chr2:2156077 | 1.79E-23 | dispersed | |
| Cpe17g01036 | Cpe-Chr17:7850204 | Cpe02g00389 | Cpe-Chr2:2156077 | 9.19E-19 | dispersed | |
| Cpe01g01672 | Cpe-Chr1:10473645 | Cpe02g00389 | Cpe-Chr2:2156077 | 5.43E-26 | transposed | |
| Cpe04g00619 | Cpe-Chr4:6412373 | Cpe02g00389 | Cpe-Chr2:2156077 | 2.85E-10 | transposed | |
| Cpe04g00862 | Cpe-Chr4:7927111 | Cpe02g00389 | Cpe-Chr2:2156077 | 2.19E-19 | transposed | |
| Cpe02g00389 | Cpe-Chr2:2156077 | Cpe06g00409 | Cpe-Chr6:2329915 | 2.79E-100 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe02g00389 | K14488 | - | csv:101216710 | 241.121 |