Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00395 ATGGCACCGAGATTGGGGTTTTTGTGTTGGTGGGGAACGGAGAAGGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCCAACTTCTCCGTCGTGGAGATCGACGGTCCTGACGCCGCATTCCGGCCGGTGGAAAAAAGTAGAGGCAAAAATGCTAAACAAGTCACATGGGTTCTTCTTTTAAAGGCCAATCGAGCTGTCGGTTGCATTACTTGGCTTGTTACAGTCCTCTGGGCCTTATTGGGAACAATCAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGGCGGGAAGTTGGGAAGAGGGAGGTTACTGTTTGGAGTAATTAGAGCTTTCTTAGTGACTTCCATGGCGATTCTTGCTTTTGAAATGCTTGCTTATTTCAGAGGCTGGCATTATTTTCAGAATCCTAATCTCCACATTCCTCAGGCTTCTGATTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTTTAGAGCAGACTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTTTGTTCCTTATCCAATCAGTGGATCGTATGATCCTTTGTTTTGGTTGCTTGTGGATAAAGTGCAAAAGAATTGAACCCAAGATTCAAGGGGATCCCTTCAGGTTGGATGATGTGGAGGGAGGTGGACACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGCGAGGTTTACGAGCAGTCTATCTCTGCAGTCTGTCAGATCGATTGGCCAAGGGACCGTTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAATATTCAAGTGCTAATTAAGGCAGAGGTTGCTAAATGGAGCCAAAAGGGAGTGAACATAATCTATCACCATCGATTAATAAGAACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGTTGTGACTATGTTACAGACTATGAATTTGTAGCAATTTTTGATGCTGACTTTCAACCAAATCCAGATTTTCTTAAACTCACAGTTCCTCATTTCAAGGTTCTTTGCGAAGTTCCCGAGTCGTATGAAGCATATAGGAAGCAGCAACATCGTTGGCATTCCGGTCCTATGCAACTATTCAGGTTGTGTCTTCCAGCAATCATAAGTTCTAAGATAGCAGCATGGAAAAAGGCAAATTTGATACTGATTTTCTTTCTATTAAGGAAGCTCATCCTTCCCTTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCCGAAGCCGAGCTTCCTCTATGGGTAGTCTGCTACGTGCCCGTCTTCATGTCCTTACTCAACATCCTTCCATCCCCAAAATCTTTTCCTTTTATCATCCCCTACCTTCTTTTCGAGAACACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGCTCGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCTGGCCGGTCCTCCGAATCCGACTTACTGGCTACTGCTGAAAGGGACTCGAAGATAATGAATCAAGCGCCGATCTATAGAGGCGCTTCTGAGAGCGAGCTTTCTGAGTTGAGCCACTTAAAGGAATGCGAAAAAGTAATCGCTGCACCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCTTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTAA 1797 43.74 MAPRLGFLCWWGTEKDSQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEGGKLGRGRLLFGVIRAFLVTSMAILAFEMLAYFRGWHYFQNPNLHIPQASDLQGLLHSLYVAWLTFRADYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKCKRIEPKIQGDPFRLDDVEGGGHKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSDDENIQVLIKAEVAKWSQKGVNIIYHHRLIRTGYKAGNLKSAMSCDYVTDYEFVAIFDADFQPNPDFLKLTVPHFKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIISSKIAAWKKANLILIFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVVCYVPVFMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLATAERDSKIMNQAPIYRGASESELSELSHLKECEKVIAAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2196292 2201974 + Cp4.1LG02g04840.1 Cpe02g00395 464344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00395 598 Pfam Glycosyl transferase family 2 235 351 IPR001173 -
Cpe02g00395 598 PANTHER - 13 346 - -
Cpe02g00395 598 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 223 383 IPR029044 -
Cpe02g00395 598 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 346 598 - -
Cpe02g00395 598 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 412 IPR029044 -
Cpe02g00395 598 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 346 - -
Cpe02g00395 598 PANTHER - 346 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00240 Cpe-Chr2:1233732 Cpe02g00395 Cpe-Chr2:2196292 0 dispersed
Cpe02g00395 Cpe-Chr2:2196292 Cpe06g00220 Cpe-Chr6:1169376 0 dispersed
Cpe02g00395 Cpe-Chr2:2196292 Cpe06g00399 Cpe-Chr6:2254365 2.57E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00395 - - csv:101217415 657.521