Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00404 ATGCAAATTCAACACTTTCATTTTCTCCCCTTCTTTCTTCTTCTTCTTCTTCTCTCAACTGGCTGTTTTGCTAAGCTTCACCATAACTATTACCATAATTCATGCCCAAATGTTGAGTCCATTGTGACAGCTGCAGTGAAGCAGAAATTTGAACAGACGTTTGTTACTGCTCCCGCTACTCTCCGCCTCTTTTTTCACGATTGTTTTGTTCGGGGTTGTGATGCTTCTGTGCTGCTTCATTCGAATAACCACACTTCTGAGAAAGACAATGCTGATAATCTTTCGCTCGCCGGAGACGGGTTTGATACTGTAATCAAAGCTAAGGCTGCTGTCGATAGCGTGCCGGAATGTAAGAACAAGGTGTCTTGTGCTGACATATTGGCTCTTGCTACTAGAGATAGCGTTCGACACCATCTTCCTTTACCTGATTTTGGATTGGATCAGCTGAATGCCATGTTTGCAAGACATGGTCTATCTCAAACAGACATGATTGCTCTCTCA 501 43.11 MQIQHFHFLPFFLLLLLLSTGCFAKLHHNYYHNSCPNVESIVTAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVLLHSNNHTSEKDNADNLSLAGDGFDTVIKAKAAVDSVPECKNKVSCADILALATRDSVRHHLPLPDFGLDQLNAMFARHGLSQTDMIALS 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2253963 2254830 + Cp4.1LG02g04740.1 Cpe02g00404 464353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00404 167 Pfam Peroxidase 43 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PRINTS Plant peroxidase signature 161 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 ProSiteProfiles Plant heme peroxidase family profile. 25 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PANTHER - 131 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 PANTHER - 5 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe02g00404 167 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cpe02g00404 167 PANTHER PEROXIDASE 131 167 - -
Cpe02g00404 167 PANTHER PEROXIDASE 5 135 - -
Cpe02g00404 167 Gene3D - 26 162 - -
Cpe02g00404 167 SUPERFAMILY Heme-dependent peroxidases 26 167 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00404 Cpe-Chr2:2253963 Cpe19g00257 Cpe-Chr19:2135988 3.67E-68 dispersed
Cpe02g00404 Cpe-Chr2:2253963 Cpe19g00661 Cpe-Chr19:5296903 4.41E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00404 K00430 - csv:101218982 264.618