Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe02g00418 ATGTTCTCCAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTCGTCTCAGACCAATGACTCCTCTTTGTCGAAGAGTCGAGAAACGCCGGGCGTGGTTCCAGTAACGGTAAAACAGATAAGTGAAGCCTCCCATTCTGGCGAAGAGAAGGCCAACTTTGTGATCAACGGCGTCGATATTACAAATGTTACAATCGTCGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACTGACATCACATTCATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGATACTTTTGACACTAAGCAAATGGATGAAATACAAGATGGAATGTATGTACGGGTAATTGGGCATCTGAAAATATTTCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTGTTACAAATTTTGACGAGATTACCTTCCACTTTATTGAATGCATACATGACCACTTGCGGAATTCCAAGTTACAGCCCAATGGAGATGTATCGACACAGTTCCAATCCTCGGATTCATCTGTGAAGCCTGCATCGTCTCAGCAGCACACTGTTGATGTTAAAAAGAACTGTGACGAATTGGTCCTTGACTATCTGCAGCTGCCCTCCAGCGTTGCAAAAGAAAGAGGAATACACAGAGATGAACTGTCCCAACAACTGAAAATTCCATTGGAGAAAATAGTGGACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTATCATTTCAAATCTGCTGCTGCATAG 771 42.41 MFSSSQFDSGSGFTSSQTNDSSLSKSRETPGVVPVTVKQISEASHSGEEKANFVINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYVRVIGHLKIFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQPNGDVSTQFQSSDSSVKPASSQQHTVDVKKNCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPLEKIVDSIRSLEDEGLIYSTIDEYHFKSAAA 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2313257 2317917 - Cp4.1LG02g04560.1 Cpe02g00418 464367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe02g00418 256 MobiDBLite consensus disorder prediction 1 30 - -
Cpe02g00418 256 MobiDBLite consensus disorder prediction 162 184 - -
Cpe02g00418 256 SUPERFAMILY Nucleic acid-binding proteins 32 158 IPR012340 -
Cpe02g00418 256 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 254 - -
Cpe02g00418 256 SUPERFAMILY Winged helix DNA-binding domain 190 254 IPR036390 -
Cpe02g00418 256 PIRSF RPA32 1 255 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Cpe02g00418 256 Pfam OB-fold nucleic acid binding domain 63 135 IPR004365 GO:0003676
Cpe02g00418 256 PANTHER REPLICATION PROTEIN A-RELATED 1 254 IPR040260 -
Cpe02g00418 256 Pfam Replication protein A C terminal 166 248 IPR014892 -
Cpe02g00418 256 Gene3D - 29 160 IPR012340 -
Cpe02g00418 256 CDD RPA2_DBD_D 62 155 - -
Cpe02g00418 256 Gene3D - 186 256 IPR036388 -
Cpe02g00418 256 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g00418 Cpe-Chr2:2313257 Cpe04g01306 Cpe-Chr4:10737078 1.30E-77 dispersed
Cpe02g00418 Cpe-Chr2:2313257 Cpe06g00385 Cpe-Chr6:2178280 1.17E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe02g00418 K10739 - csv:101220176 435.647