Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe02g00419 | ATGCCGGGGCTAACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGATACAATCTTAAGCGCAAGGAAATTGCCTTAAACGGGTTTAAGTTTTGCAAGGAATTTGTTAAAATTCTGGATGTTTTTAAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCATATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGCGAATTTCTAATAGGGTGACCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTCGAGCATGATACCATTGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCTGAAAGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCGAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGACGAGAACGAAGAAGTAGAATTGGAAGAATTTTATGACTACAGTAGCAGTTATGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACAAGCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACCGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACATAATCCGAAACCTGCCTAATAATGTTCCATACTAG | 1242 | 43.96 | MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKEIALNGFKFCKEFVKILDVFKVANVPGVTEALFLARQSAAAAQENAKSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNRVTQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDFEHDTIDSCMVHMHKQHGFFIPDVEYLKDLKGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQRTSDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNIIRNLPNNVPY | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2318966 | 2322208 | - | Cp4.1LG02g04550.1 | Cpe02g00419 | 464368 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe02g00419 | 413 | MobiDBLite | consensus disorder prediction | 148 | 176 | - | - | |
Cpe02g00419 | 413 | PANTHER | ZINC FINGER PROTEIN 622 | 1 | 41 | IPR040025 | - | |
Cpe02g00419 | 413 | SMART | c2h2final6 | 4 | 28 | IPR013087 | - | |
Cpe02g00419 | 413 | SMART | c2h2final6 | 185 | 208 | IPR013087 | - | |
Cpe02g00419 | 413 | SMART | c2h2final6 | 236 | 263 | IPR013087 | - | |
Cpe02g00419 | 413 | SMART | c2h2final6 | 89 | 113 | IPR013087 | - | |
Cpe02g00419 | 413 | SUPERFAMILY | beta-beta-alpha zinc fingers | 171 | 227 | IPR036236 | - | |
Cpe02g00419 | 413 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 36 | IPR036236 | - | |
Cpe02g00419 | 413 | MobiDBLite | consensus disorder prediction | 132 | 176 | - | - | |
Cpe02g00419 | 413 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 91 | 113 | IPR013087 | - | |
Cpe02g00419 | 413 | PANTHER | ZINC FINGER PROTEIN 622 | 56 | 413 | IPR040025 | - | |
Cpe02g00419 | 413 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 28 | IPR013087 | - | |
Cpe02g00419 | 413 | SUPERFAMILY | beta-beta-alpha zinc fingers | 88 | 119 | IPR036236 | - | |
Cpe02g00419 | 413 | Pfam | C2H2 type zinc-finger (2 copies) | 187 | 288 | IPR041661 | - | |
Cpe02g00419 | 413 | PANTHER | ZINC FINGER PROTEIN-RELATED | 56 | 413 | - | - | |
Cpe02g00419 | 413 | PANTHER | ZINC FINGER PROTEIN-RELATED | 1 | 41 | - | - | |
Cpe02g00419 | 413 | SMART | ZnF_U1_5 | 86 | 120 | IPR003604 | GO:0003676|GO:0008270 | |
Cpe02g00419 | 413 | SMART | ZnF_U1_5 | 1 | 35 | IPR003604 | GO:0003676|GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe02g00419 | Cpe-Chr2:2318966 | Cpe06g00387 | Cpe-Chr6:2192998 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49001 | PF12756 | zf-C2H2_2 | 1.00E-25 | CL0361 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe02g00419 | K14816 | - | csv:101219700 | 620.157 |